SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene32962

Length: 408 nt

UniGene Fasta

>sp_v1.1_unigene32962
TCTATCTTTCCAACATCGACGATCAACTGGGAACAAGGTACCATGTTCCCAAGCTTCTATTTTATCGCAGCGACTCGTCCAAGAAGAAACATGTAAAGGATCCAGTCAGTGTTATCAAAGAGGCTTTAGCAAAGGTTCTGGTGCATTATTATCCTTTTGCTGGAAGATTGAGAGATGCAGATAACGGTAAACTCAAAGTGGACTGCACTGGCGAAGGGGTTCTTTTCGTAGAAGCGGATGCCGATATCTCCTTGGAAGAGTTTGGGGATCTCTATCCACCTATTCCTCGCGGAGATGACTTTATCAATAATGTTCCAGGGTCGGAAAACATCACAGACTCTCCGCTACTTCTGATTCAGGTAACCCGTCTGAGATGCGGAGGCTTCGTATTGGGTTTGCGGTCGAATC

Ace file of the UniGene sp_v1.1_unigene32962

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transferase, putative n=1 Tax=Ricinus communis RepID=B9SDF2_RICCO	-	-	3.0e-40	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	68%
Blast2go	protein	-	-	1.4013e-45	76%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Transferase	IPR003480	-	1.4013e-45	76%
Blast2go	Chloramphenicol acetyltransferase-like domain	IPR023213	-	1.4013e-45	76%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLR5

Fln msg: Distance to subject end: 288 aas, your sequence is shorter than subject: 135 - 448

Fln protein: YLSNIDDQLGTRYHVPKLLFYRSDSSKKKHVKDPVSVIKEALAKVLVHYYPFAGRLRDADNGKLKVDCTGEGVLFVEADADISLEEFGDLYPPIPRGDDFINNVPGSENITDSPLLLIQVTRLRCGGFVLGLRSN

Protein Length: 136

Fln nts: TCTATCTTTCCAACATCGACGATCAACTGGGAACAAGGTACCATGTTCCCAAGCTTCTATTTTATCGCAGCGACTCGTCCAAGAAGAAACATGTAAAGGATCCAGTCAGTGTTATCAAAGAGGCTTTAGCAAAGGTTCTGGTGCATTATTATCCTTTTGCTGGAAGATTGAGAGATGCAGATAACGGTAAACTCAAAGTGGACTGCACTGGCGAAGGGGTTCTTTTCGTAGAAGCGGATGCCGATATCTCCTTGGAAGAGTTTGGGGATCTCTATCCACCTATTCCTCGCGGAGATGACTTTATCAATAATGTTCCAGGGTCGGAAAACATCACAGACTCTCCGCTACTTCTGATTCAGGTAACCCGTCTGAGATGCGGAGGCTTCGTATTGGGTTTGCGGTCGAATC

Fln Alignment:

sp_v1.1_unigene32962___YLSNIDDQLGTRYHVPKLLFYRSDSSKKKHVKDPVSVIKEALAKVLVHYYPFAGRLRDADNGKLKVDCTGEGVLFVEADADISLEEFGDLYPPIPRGDDFINNVPGSENITDSPLLLIQVTRLRCGGFVLGLRSN
B8LLR5_______________YLSNIDDQAGLRFHIPVVQFYQFDPSKKG--EDPARVIREGLAKALVFYYPFAGRLRDAPAGKLVVDCTGEGVLFVEADADVALEEFGDLQPPFPCWEDLLHDVPASLTLTNSPLLLIQVTRLRCGGFIFALRLN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain