SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene32540

Length: 763 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene32540

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycine-rich protein	-	-	2.0e-17	43%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	39%
Blast2go	glycine-rich protein	-	-	4.17528e-20	55%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Plastocyanin-like	IPR003245	-	4.17528e-20	55%
Blast2go	Cupredoxin	IPR008972	-	4.17528e-20	55%

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
176	66	33			0.997464
179		33	66		0.997467
181			66	33	0.997471
182		66	33		0.997464
186	66	33			0.997471
201	25		25	50	0.995571
203			25	75	0.996481
204	25	75			0.996479
208			66	33	0.997452
210		66	33		0.997452
211	66		33		0.997452
212	66	33			0.997452
219	33	66			0.997452
222	66	33			0.997452
223	33		66		0.997452
295			33	66	1.0
296	66			33	1.0
299	66			33	1.0
300			33	66	1.0
302	66	33			1.0
305			60	40	1.0
306		60	40		1.0
307	60		40		1.0
308		40		60	1.0
310	60		40		1.0
312		40		60	1.0
313	40		60		1.0
314	60	40			1.0
315			60	40	1.0
316		40	60		1.0
317	40		60		1.0
479	28		71		1.0
491	28		71		1.0
544	66		33		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain