SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene32459

Length: 334 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene32459
CGTCGTGACCTTGGCTGTCACTCGTGGCCTTGGTGTGATTGCAAATGAGGTACTGGATGGAGGATACAAAGAAATGGGATTCAGTTATTTTAAGACCCGGTTCGAACTGAAAGAAAGGGGAGAATCATTGACATGTGCAGAATGCACAGTTGAATACCAGACCGTCGGAGAACAAGGTCGTTCGCCAGAAGAAGCACTGCAAGCGAGCTTCTTCATCTTGAAATCCATGGAGTCTTACTTGCTATCAAAATGAGACAGCTCTTTGGGAGAATTTTTTCGGTTTCCAACATGCCATGGCCTTTAAAGTTTACATAAAATCTTCTGTTATATAGGG

Ace file of the UniGene sp_v1.1_unigene32459

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Bet_v_1 domain containing protein	-	-	6.0e-05	23%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	34%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bet v I domain	IPR000916	-	0.0	-
Blast2go	START-like domain	IPR023393	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9N590

Fln msg: your sequence is shorter than subject: 84 - 154

Fln protein: VVTLAVTRGLGVIANEVLDGGYKEMGFSYFKTRFELKERGESLTCAECTVEYQTVGEQGRSPEEALQASFFILKSMESYLLSK*

Protein Length: 85

Fln nts: CGTCGTGACCTTGGCTGTCACTCGTGGCCTTGGTGTGATTGCAAATGAGGTACTGGATGGAGGATACAAAGAAATGGGATTCAGTTATTTTAAGACCCGGTTCGAACTGAAAGAAAGGGGAGAATCATTGACATGTGCAGAATGCACAGTTGAATACCAGACCGTCGGAGAACAAGGTCGTTCGCCAGAAGAAGCACTGCAAGCGAGCTTCTTCATCTTGAAATCCATGGAGTCTTACTTGCTATCAAAATGA___GACAGCTCTTTGGGAGAATTTTTTCGGTTTCCAACATGCCATGGCCTTTAAAGTTTACATAAAATCTTCTGTTATATAGGG

Fln Alignment:

sp_v1.1_unigene32459___IANEVLDGGYKEMGFSYFKTRFELKERGESLTCAECTVEYQTVGEQGRSPEEALQASFFILKSMESYLLS
B9N590_______________IGLEVIEGGHLNHGFSHYKTTFQLTSTGEQETLIDVTISYESQVEEDTVPSNSASSTLVFIKHMENYLMN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain