SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene32199

Length: 603 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene32199

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ethylene insensitive protein, putative	-	-	1.0e-27	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	30%
Blast2go	ein2 -like nramp transporter	-	-	6.31414e-32	62%

Source	GOs	Term	Type	e value	Identity
Blast2go	anatomical structure morphogenesis	GO:0009653	Biological Process	6.31414e-32	62%
Blast2go	transport	GO:0006810	Biological Process	6.31414e-32	62%
Blast2go	tissue development	GO:0009888	Biological Process	6.31414e-32	62%
Blast2go	response to other organism	GO:0051707	Biological Process	6.31414e-32	62%
Blast2go	hormone-mediated signaling pathway	GO:0009755	Biological Process	6.31414e-32	62%
Blast2go	regulation of response to stimulus	GO:0048583	Biological Process	6.31414e-32	62%
Blast2go	response to osmotic stress	GO:0006970	Biological Process	6.31414e-32	62%
Blast2go	regulation of cellular process	GO:0050794	Biological Process	6.31414e-32	62%
Blast2go	defense response	GO:0006952	Biological Process	6.31414e-32	62%
Blast2go	response to ethylene stimulus	GO:0009723	Biological Process	6.31414e-32	62%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Natural resistance-associated macrophage protein	IPR001046	-	6.31414e-32	62%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
113		66	33		0.997461
242	33	66			0.997452
364		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain