SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene31685

Length: 618 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene31685 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Purple acid phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SXP8_RICCO	-	-	2.0e-18	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	iron -zinc purple acid phosphatase	-	-	5.93228e-28	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	phosphate ion homeostasis	GO:0055062	Biological Process	5.93228e-28	81%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	5.93228e-28	81%
Blast2go	vacuole	GO:0005773	Cellular Component	5.93228e-28	81%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
37	33		66		0.99993
47		33		66	0.997452
434		75		25	0.996473
436	25		75		0.996473
437			25	75	0.996473
441	25		75		0.996473
444	75		25		0.996473
449	80		20		0.995505
450			20	80	0.995499
452		20	80		0.995496
573			66	33	0.997476
574			33	66	0.997476
575	33			66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain