SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene31656

Length: 478 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

>sp_v1.1_unigene31656
AATTAGGGATGATACTTCTGGCCTCAACTTCGTCCACGCTTCCGTCACGACTATATGTGCTAAAGGAAGGCATTTGAGTCATTCAATCAATAACGAAAGAACACCAACCCAACTATGTGGGTTAGGGAAGAAGGCATTGAGATTCATCTCAGCTGTGGCTGTTCCTATTCCTCCACCTCCAGTTAATGACAAAGAGGAAAGAATGCACCTTGCTGAAGATTATGGATTCATCCAAATTGGGGAGCCTGTTCCTGATAATGTGACATTGAAGGATGTCATTGATACACTACCTCAGGAGGCGTTTGAGATTAACTATTTTAAGGCTTGGAGAACTGTAGTTACATCAATTACTGCTTATTCACTAGGGATTTATATTATATCAAGAGCACCTTGGTACCTCCTCCCTCTTGCTTGGGCATGGACTGGAACTGCAATCACCGGGTTCTTTGTGATAGGACATGATTGTGCACACAAGTGC

Ace file of the UniGene sp_v1.1_unigene31656

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	omega-6 fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]	-	-	2.0e-36	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	omega-6 fatty acid desaturase	-	-	1.1743e-38	86%

Source	ECs	Term	Type	e value	Identity
AutoFact	Oxidoreductases, Acting on paired donors, with incorporation or reduction of molecular oxygen, With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.	EC:1.14.19.-	-	2.0e-36	69%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	alpha-Linolenic acid metabolism	00592		2.0e-36	69%
AutoFact	Biosynthesis of unsaturated fatty acids	01040		2.0e-36	69%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	1.1743e-38	86%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NV95

Fln msg: Distance to subject end: 270 aas, your sequence is shorter than subject: 159 - 460

Fln protein: IRDDTSGLNFVHASVTTICAKGRHLSHSINNERTPTQLCGLGKKALRFISAVAVPIPPPPVNDKEERMHLAEDYGFIQIGEPVPDNVTLKDVIDTLPQEAFEINYFKAWRTVVTSITAYSLGIYIISRAPWYLLPLAWAWTGTAITGFFVIGHDCAHKC

Protein Length: 160

Fln nts: AATTAGGGATGATACTTCTGGCCTCAACTTCGTCCACGCTTCCGTCACGACTATATGTGCTAAAGGAAGGCATTTGAGTCATTCAATCAATAACGAAAGAACACCAACCCAACTATGTGGGTTAGGGAAGAAGGCATTGAGATTCATCTCAGCTGTGGCTGTTCCTATTCCTCCACCTCCAGTTAATGACAAAGAGGAAAGAATGCACCTTGCTGAAGATTATGGATTCATCCAAATTGGGGAGCCTGTTCCTGATAATGTGACATTGAAGGATGTCATTGATACACTACCTCAGGAGGCGTTTGAGATTAACTATTTTAAGGCTTGGAGAACTGTAGTTACATCAATTACTGCTTATTCACTAGGGATTTATATTATATCAAGAGCACCTTGGTACCTCCTCCCTCTTGCTTGGGCATGGACTGGAACTGCAATCACCGGGTTCTTTGTGATAGGACATGATTGTGCACACAAGTGC

Fln Alignment:

sp_v1.1_unigene31656___NDKEERMHLAEDYGFIQIGEPVPDNVTLKDVIDTLPQEAFEINYFKAWRTVVTSITAYSLGIYIISRAPWYLLPLAWAWTGTAITGFFVIGHDCAHK
A9NV95_______________SDREERNRISEKYGFTQIGEPVPDNIILKNVIDSLPQEVFEIDDTKAWKTVAISVAAYSLGLFLIAKAPWYLLPLAWAWTGTAITGFFVIGHDCAHK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain