SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene31091

Length: 617 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene31091

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	FMA; FMA (FAMA); DNA binding / transcription activator/ transcription factor	-	-	4.0e-22	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%
Blast2go	protein	-	-	9.6238e-39	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	guard cell differentiation	GO:0010052	Biological Process	9.6238e-39	74%
Blast2go	negative regulation of cell division	GO:0051782	Biological Process	9.6238e-39	74%
Blast2go	positive regulation of cell differentiation	GO:0045597	Biological Process	9.6238e-39	74%
Blast2go	positive regulation of cellular transcription, DNA-dependent	GO:0045941	Biological Process	9.6238e-39	74%
Blast2go	transcription activator activity	GO:0016563	Molecular Function	9.6238e-39	74%
Blast2go	nucleus	GO:0005634	Cellular Component	9.6238e-39	74%

Full-Lengther Next Prediction

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
237		25		75	0.996473
273		16		83	0.994519
274			16	83	0.994519
281	16	83			0.994516
282		16		83	0.994516
285	80			20	0.995493
286		80	20		0.995493
287			20	80	0.995493
289		80		20	0.995493
290			20	80	0.995493
295	80			20	0.995493
301	83		16		0.994515
323			60	40	1.0
519		20		80	0.995503
528	80		20		0.995503

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain