SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30957

Length: 759 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene30957

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Silicon transporter, putative n=1 Tax=Ricinus communis RepID=B9T848_RICCO	-	-	1.0e-27	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Blast2go	major intrinsic protein	-	-	2.04985e-27	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	silicate transport	GO:0015708	Biological Process	2.04985e-27	74%
Blast2go	silicate transmembrane transporter activity	GO:0015115	Molecular Function	2.04985e-27	74%
Blast2go	Casparian strip	GO:0048226	Cellular Component	2.04985e-27	74%
Blast2go	membrane	GO:0016020	Cellular Component	2.04985e-27	74%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Major intrinsic protein	IPR000425	-	2.04985e-27	74%
Blast2go	Aquaporin-like	IPR023271	-	2.04985e-27	74%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	C %	G %	T %	Probability
322	16	83		0.994512
323		83	16	0.994512
564	66	33		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain