SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30904

Length: 184 nt

UniGene Fasta

>sp_v1.1_unigene30904
CGTCGTGACCTTGGCTGTCACTCAAATCAGCTCTAATGAGAAATTCGACAGAGGCCATGAAGGAATCCAAGGTTCAAGATATACTAAATTTGATGAATCTGCTCGCTTTCAAAAGAATGAACTTTGAGGAGTTTTGTGCTGCTGCAACAAATGTATATCAACTAGAAGCCCTTGATCATTGGGA

Ace file of the UniGene sp_v1.1_unigene30904

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S8J6_RICCO	-	-	4.0e-13	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	69%
Blast2go	calcium-dependent protein	-	-	1.0304e-13	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWM8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 69 aas, your sequence is shorter than subject: 60 - 589

Fln protein: S*PWLSLKSALMRNSTEAMKESKVQDILNLMNLLAFKRMNFEEFCAAATNVYQLEALDHW

Protein Length: 61

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATCAGCTCTAATGAGAAATTCGACAGAGGCCATGAAGGAATCCAAGGTTCAAGATATACTAAATTTGATGAATCTGCTCGCTTTCAAAAGAATGAACTTTGAGGAGTTTTGTGCTGCTGCAACAAATGTATATCAACTAGAAGCCCTTGATCATTGGGA

Fln Alignment:

sp_v1.1_unigene30904___SLKSALMRNSTEAMKESKVQDILNLMNLLAFKRMNFEEFCAAATNVYQLEALDHW
A9NWM8_______________NFRLALMRNATEAMKESKVPDILNTMEHLASRRMDFEEFCAAAISIYQLEAVDRW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain