SustainPineDB

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Assembly info
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SNPs
SSRs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30408

Length: 887 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene30408

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	EMB2217 (embryo defective 2217)	-	-	79%
FL-Next	sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	84%
Blast2go	pentatricopeptide repeat-containing	-	-	85%

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
239	20		80		0.995495
299			14	85	0.993534
300		85		14	0.993534
302	85		14		0.993534
306	14		85		0.993534
307		14		85	0.993535
308		14		85	0.993535
310	83			16	0.994512
312	83		16		0.994512
313	83	16			0.994512
314	83			16	0.994512
316		83		16	0.994512
317		16	83		0.994512
319	83	16			0.994512
321		16	83		0.994512
322	16	83			0.994512
541	90			10	0.903175
543	90			10	0.903175
544	10	90			0.903175
547	90		10		0.903175
549		10		90	0.903175
550	90	10			0.903175
551		90		10	0.903175
552	88			11	0.923564
553		88	11		0.923564
554			11	88	0.923564
557			11	88	0.923564
560	12	87			0.992554
563		12	87		0.992554
564	12			87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain