SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30323

Length: 850 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene30323

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI	-	-	6.0e-39	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	71%
Blast2go	early light-inducible protein	-	-	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Chlorophyll A-B binding protein	IPR022796	-	0.0	82%
Blast2go	Chlorophyll a/b binding protein domain	IPR023329	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 41)

Position	A %	C %	G %	T %	Probability
41	14			85	0.993535
45	85		14		0.993533
46		85	14		0.993534
47		85	14		0.993533
100		50	50		1.0
151		14		85	0.993533
174	50		50		1.0
265	50			50	1.0
284		62	37		1.0
285	62	37			1.0
286			62	37	1.0
287	62	37			1.0
292	12		87		0.992554
338	85	14			0.993533
392		16	83		0.994512
406	14	85			0.993533
408	85		14		0.993533
410			14	85	0.993533
575			15	84	0.999986
581		15	84		0.999986
600		18		81	0.999994
608	81		18		0.999994
611		81		18	0.999994
617		18		81	0.999994
618		18		81	0.999994
620		10	90		0.90298
623	90		10		0.90298
638		83		16	0.999991
679		45	54		1.0
698		80		20	0.999996
716		50	50		1.0
743	18	81			0.999994
745	81		18		0.999994
754			72	27	1.0
761		63		36	1.0
783	90		10		0.90298
785	10	90			0.90298
797		40		60	1.0
808	60	40			1.0
809		40	60		1.0
822	40		60		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain