SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30181

Length: 1121 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene30181

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	N6-adenosine-methyltransferase 70 kDa subunit, putative (EC:2.1.1.62)	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	n6-adenosine-methyltransferase 70 kda	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	0.0	88%

Source	KEGGs	Term	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	88%
Blast2go	Tetracycline biosynthesis	00253	88%
Blast2go	Histidine metabolism	00340	88%
Blast2go	Tyrosine metabolism	00350	88%
Blast2go	Phenylalanine metabolism	00360	88%
Blast2go	Tryptophan metabolism	00380	88%
Blast2go	Benzoxazinoid biosynthesis	00402	88%
Blast2go	Selenocompound metabolism	00450	88%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	88%
Blast2go	Polycyclic aromatic hydrocarbon degradation	00624	88%
Blast2go	Methane metabolism	00680	88%
Blast2go	Porphyrin and chlorophyll metabolism	00860	88%
Blast2go	Carotenoid biosynthesis	00906	88%
Blast2go	Phenylpropanoid biosynthesis	00940	88%
Blast2go	Flavonoid biosynthesis	00941	88%
Blast2go	Anthocyanin biosynthesis	00942	88%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	88%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	88%
Blast2go	Insect hormone biosynthesis	00981	88%
Blast2go	Biosynthesis of type II polyketide products	01057	88%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	88%
Blast2go	Metabolic pathways	01100	88%
Blast2go	Biosynthesis of secondary metabolites	01110	88%

Source	GOs	Term	Type	Identity
Blast2go	mRNA methylation	GO:0080009	Biological Process	88%
Blast2go	protein binding	GO:0005515	Molecular Function	88%
Blast2go	methyltransferase activity	GO:0008168	Molecular Function	88%
Blast2go	nuclear speck	GO:0016607	Cellular Component	88%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPF6

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 218 - 804

Fln protein: S*PWLSLIWVTGRAMELGRECLELWGYRRIEELIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGDPEVNRNIDTDVLVSEVRETSRKPDEMYPMLERISPRTRKLELFARMHNTHAGWMSLGNQLNGVRLVDEGLRARFKAAYSDVEVQPPSPTRPAPVSDGEATAPANNRFTGMEAKVTPEHMPMRGSENYASEEKFVAKDAETITWLSLILY*

Protein Length: 219

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTGGGTTACTGGACGTGCAATGGAACTTGGACGAGAATGTCTGGAGCTATGGGGTTATCGTCGCATTGAAGAACTTATCTGGGTGAAGACTAATCAGCTTCAGCGAATTATTAGAACAGGGAGAACAGGCCACTGGTTGAATCACAGTAAAGAACATTGTCTTGTTGGTATTAAGGGTGATCCAGAAGTGAACCGTAACATTGACACCGATGTCCTTGTTTCTGAAGTTCGAGAGACAAGCCGAAAACCGGATGAAATGTATCCGATGCTAGAAAGGATAAGTCCTCGTACCCGAAAACTTGAACTGTTTGCACGGATGCATAACACTCATGCAGGGTGGATGTCACTTGGTAATCAATTAAATGGGGTGAGATTAGTTGATGAAGGATTGAGAGCAAGGTTCAAAGCCGCCTATTCAGATGTGGAGGTGCAGCCTCCTTCTCCTACAAGACCTGCTCCCGTGTCTGATGGAGAGGCAACTGCACCAGCAAACAACCGTTTTACCGGAATGGAAGCCAAGGTTACACCTGAACACATGCCTATGAGAGGATCAGAAAATTATGCATCAGAGGAGAAGTTTGTAGCTAAAGACGCTGAAACGATAACTTGGCTGTCACTCATTTTGTATTGA___ACCGACCAAGAACTTTTTAAAAGGTCGTCTTGGTTGAAGGGGAAAGCAATTATATAACACTGGTGACCTTTCAGTGTTTGGGAATCTAATTGATGGTTATGATGATGTCTGTAGCAAAGGAGAATTCCACAAAGAAGATTTGTAGCTGGTGACAGTAGAAAAATGTTTTCGCAGCGCTTAGGTCCAACCCTCATCTTTTCAAAAGGCATTTCTTGCAAATTCAACTGTCCGAAAATGAGCGCTTTATATGAATAGAATCTACAGTAGCAGCTGAACATGTTCAGAAATGGTGTACTTCTTGTCAATGAAATCTGTAGGTCCAAAATGCAAAAGGTGATGATAAAATGTATTTTGGGAATTTTATGTAGTAATCACTTTCTGGAATTTTGATTGAAAAATAGTTAATGTTTACTAAAAACTAGTCAGATATTTTCAACGTGTATGTACTATTGGTTTTCCCTTAGG

Fln Alignment:

sp_v1.1_unigene30181___LSLIWVTGRAMELGRECLELWGYRRIEELIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGDPEVNRNIDTDVLVSEVRETSRKPDEMYPMLERISPRTRKLELFARMHNTHAGWMSLGNQLNGVRLVDEGLRARFKAAYSDVEVQPPSPTRPAPVSDGEATAPANNRFTGMEAKVTPEHMPMRGSENYASEEKFVAKDAETIT
B8LPF6_______________LIFLWVTGRAMELGRECLELWGYRRIEELIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGDPEVNRNIDTDVLVSEVRETSRKPDEMYPMLERISPRTRKLELFARMHNTHAGWMSLGNQLNGVRLVDEGLRARFKAAYSDVEVQPASPPRAAPVSDGEATAQAKNRFSGMEAKVTPEHMPMTGSENYASEEKFVAKDSEMIT

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
487	20		80		0.995493
490			20	80	0.995493
491		80	20		0.995493
734		60		40	1.0
743	10			90	0.902983
753			10	90	0.902981
757	40			60	1.0
767	10		90		0.90298
772		10		90	0.90298
775	10	90			0.902983
776			10	90	0.902983
786	10		90		0.90298
812		90		10	0.90298
821	10		90		0.90298
823	80		20		0.999996
824	10		90		0.902989
838	50		50		1.0
856		77		22	0.999999
863	44			55	1.0
887		40		60	1.0
980		71		28	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain