SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene30112

Length: 691 nt

Origin of reads: Biogeco_1 Biogeco_2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene30112 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CYP736A8v1; cytochrome P450	-	-	3.0e-26	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	flavonoid 3 -hydroxylase	-	-	0.0	65%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	0.0	65%
Blast2go	Cytochrome P450, E-class, group I	IPR002401	-	0.0	65%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
309		16		83	0.994512
382		16		83	0.994512
406			80	20	0.995493
410	80		20		0.995493
412	80		20		0.995493
414		20	80		0.995493
417		80	20		0.995494
418	20	80			0.995494
420	20	80			0.995494
422			20	80	0.995493
423	80		20		0.995493
425		20		80	0.995493
426	20			80	0.995493
428			20	80	0.995493
429	20		80		0.995493
430		20		80	0.995493
554		33	66		0.997454
555	66	33			0.997455
557		33	66		0.997455

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain