SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene29821

Length: 633 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene29821 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Preprotein translocase subunit secY, chloroplastic n=2 Tax=Arabidopsis RepID=SECY_ARATH	-	-	70%
FL-Next	sp=Preprotein translocase subunit secY, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	77%
Blast2go	preprotein translocase secy protein	-	-	89%

Source	GOs	Term	Type	Identity
Blast2go	transport	GO:0006810	Biological Process	89%
Blast2go	protein binding	GO:0005515	Molecular Function	89%
Blast2go	membrane	GO:0016020	Cellular Component	89%
Blast2go	plastid	GO:0009536	Cellular Component	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	SecY protein	IPR002208	-	0.0	89%
Blast2go	SecY subunit domain	IPR023201	-	0.0	89%

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain