SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene29630

Length: 1626 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene29630

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Purple acid phosphatase 22 n=2 Tax=Arabidopsis RepID=PPA22_ARATH	-	-	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	atpap22 pap22	-	-	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Metallophosphoesterase domain	IPR004843	-	0.0	77%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LRS5

Fln msg: atg_distance in limit (1-15): atg_distance = 16, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 376 - 424

Fln protein: RGDLGCPSLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSCQKLQESSTSYDDEL*

Protein Length: 377

Fln nts: ATAGTCCAGAGCATTTGTCTCGTATGATTTCAATATAGAGAGCCATATCTGAAGATTTCTTCTGTTATATACATTTTGATTAGGGTTCGTATTAATGACGATGGCAGGTTCATATTTCTGTGGTAGGAAGTAATTCTATGAGGGTAACGTGGTGACCTTGGCTGTCCTTCGTTGGTTGAATATGGAAAATCTCCGGGAAACTACACTTCTTCTGCTTTTGGGGAGATTTCTTCTAATTATTGGTATTTGTTCTACAAATCTGGCTACATTCATAACGTTGTGATTGGGCCACTTGAAGCGAATACTACCTACTATTATAGATGTGGAGGACATGGTCCGGATTTCAAGCTCAAGACACCACCGTCAGAGTTACCCATTGTTTTTTCTGTCGCAGGTGATTTGGGACAAACTGAGTGGACGAAATCAACTCTGCAACACATTAATGAGAGTTATCATGATGTTTTCCTTCTGCCTGGTGATCTCTCCTATGCTGACAACACCCAGACTCTGTGGGATTCATTTGGGAGGTTGGTGGAACCTCTGGCCAGCAGCAGGCCCTGGATGGTCACAGAAGGAAACCATGAGGTTGAAACAATTATCCTCCTGATGGAACATGCCTTTAAATCCTACAATGCTAGGTGGCAAATGCCATATAAAGAAAGCGGTTCCACTTCAAACTTGTATTACTCTTTTGAAGTTGCAGGAGTGCACGTTATCATGCTTGGTTCCTACGCTAATTATGGGAAGGATTCAGACCAATACAAGTGGCTGCAGGGTGATCTTGGAAAGGTAGATAGAGTGAAAACGCCCTGGATTTTTGTTCTGTTACATGCTCCCTGGTATAATACAAATGCTGCTCATGAGGGTGAGGGAGAGAAGATGAGAGTAGCCATGGAGCCTTTGCTTTACGCTGCCAAAGTGGATCTAGTTTTTGCAGGACATGTGCACGCTTATGAACGTTTTACTCATGTGTACAATAACACAGCTGATCCTTGTGGACCAATTTACATTACCATTGGAGATGGAGGAAACCGTGAAGGGCTTGCTTTAGATTTCAAGGAGCCACAATCTGAATTGTCTCTGTTCCGTGAAGCGAGCTTTGGACATGGTGAACTTACAGTATACAATGCAACACATACACATTGGATTTGGCATCGTAATGAAGACGTTGAGTTAGTGGTATCTGATGAAGTTTGGTTAACCAGTCTCAGCAATTCAGCAAACTCGTGTCAGAAATTACAGGAAAGTTCCACATCATATGATGACGAGCTATAA___GGAACCCATAAGTAAACGGATGAAGTCTTTTTTTAGCATTGAAGGCTGGGATTTCATTACAGGAATTGACCTCCAGACGAGAGATAACTATTTGCTTCTGATGAATGTTAAAATAGATTAGATAATAAGATGTGAGAGACTCCGGTATGTTAGCAGGTTGCGTAGTGAACAGCTTCAGAATCAAGTGGAGTGGGATGTGGAGATGAGTGCAAAACTTGCCCTGTATTTGTTACGACAAGATCCAGATCCAAAATATGGAAGGGACTGATTTTTAAAACAAATAAAATGTGTTAGGGTTTACATTTCTTGTATTAGAATGCGCAAAATTGTAATTAAATGCCACGTTAAAAC

Fln Alignment:

sp_v1.1_unigene29630___SLVEYGKSPGNYTSSAFGEISSNYWYLFYKSGYIHNVVIGPLEANTTYYYRCGGHGPDFKLKTPPSELPIVFSVAGDLGQTEWTKSTLQHINESYHDVFLLPGDLSYADNTQTLWDSFGRLVEPLASSRPWMVTEGNHEVETIILLMEHAFKSYNARWQMPYKESGSTSNLYYSFEVAGVHVIMLGSYANYGKDSDQYKWLQGDLGKVDRVKTPWIFVLLHAPWYNTNAAHEGEGEKMRVAMEPLLYAAKVDLVFAGHVHAYERFTHVYNNTADPCGPIYITIGDGGNREGLALDFKEPQSELSLFREASFGHGELTVYNATHTHWIWHRNEDVELVVSDEVWLTSLSNSANSC
B8LRS5_______________SIVEYGTSSGKYTSSAEGE-NTNYRYLLYKSANVHHVVIGPLETGTLYYYRCGGNGAEYSFKTPPAQLPIAFAVVGDLGQTGWTTSTLQHVQQMNYDVLLLPGDLSYADYRQPLWDSFGRLVEPLASSRPWMVTQGNHEIEKIPLLVSTPFKAYNARWKMPYQESGSPSNLYYSFEVAGAHILMLGSYAEFGTDSDQYKWLQGDLSRVNRRKTPWLIALIHAPWYNTNTAHQGEGDDMKDAMEELLHAAKVDIVFAGHVHAYERFTRVFKNQPNPCGSVHITIGDGGNREGLASRYEDPPSGLSEFREASFGHGEFVIYNATHAHWTWHQNDDDESVVSDEVWINSLASVSNSC

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
488		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain