SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene29239

Length: 952 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene29239

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SRU1_VITVI	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	31%
Blast2go	membrane related protein cp5	-	-	65%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Lipid-binding START	IPR002913	-	0.0	65%
Blast2go	START-like domain	IPR023393	-	0.0	65%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
371	90	10			0.90298
501		88	11		0.991528
502	88		11		0.923564
503	88	11			0.923564
504	88			11	0.923564
506			87	12	0.992554
507	87	12			0.992554
508	12			87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain