SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene29177

Length: 1061 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene29177

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	nicotinamide-nucleotide adenylyltransferase 1; K06210 nicotinamide mononucleotide adenylyltransferase [EC:2.7.7.1 2.7.7.18]	-	-	61%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	63%
Blast2go	protein	-	-	73%

Source	ECs	Term	Type	e value	Identity
AutoFact	Nicotinamide-nucleotide adenylyltransferase.	EC:2.7.7.1	-	0.0	61%

Source	KEGGs	Term	Type	Identity
AutoFact	Nicotinate and nicotinamide metabolism	00760		61%
AutoFact	Metabolic pathways	01100		61%
AutoFact	Nicotinate-nucleotide adenylyltransferase.	EC:2.7.7.18	-	61%

Source	KEGGs	Term	Type	e value	Identity
AutoFact	Nicotinate and nicotinamide metabolism	00760		0.0	61%
AutoFact	Metabolic pathways	01100		0.0	61%

Source	InterPros	Term	Type	Identity
Blast2go	Cytidylyltransferase	IPR004820	-	73%
Blast2go	Probable nicotinate-nucleotide adenylyltransferase	IPR005248	-	73%
Blast2go	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	73%
Blast2go	Nicotinamide mononucleotide adenylyltransferase, C-terminal	IPR019450	-	73%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
697			25	25	0.995533
699		50	50		1.0
700	75		25		0.996473
701		25		75	0.996473
702			25	75	0.996473
703	75	25			0.996473
704	75	25			0.996473
705		25		50	0.995533
708			25	75	0.996473
709			25	75	0.996473
713			75	25	0.996473
715	33		66		0.997452
721	75	25			0.996473
723		25		75	0.996473
806	10			90	0.903175
809			10	90	0.903134

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain