SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28726

Length: 746 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28726

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Metacaspase type II n=2 Tax=Picea RepID=Q70VV0_PICAB	-	-	9.0e-33	40%
FL-Next	tr=Metacaspase type II; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	40%
Blast2go	latex-abundant protein	-	-	1.5773e-32	56%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on peptide bonds (peptide hydrolases), Cysteine endopeptidases.	EC:3.4.22.-	-	1.5773e-32	56%

Source	GOs	Term	Type	e value	Identity
Blast2go	induction of apoptosis	GO:0006917	Biological Process	1.5773e-32	56%
Blast2go	cysteine-type endopeptidase activity	GO:0004197	Molecular Function	1.5773e-32	56%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Peptidase C14, caspase catalytic	IPR011600	-	1.5773e-32	56%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
456		33	66		0.997452
476			66	33	0.997452
482		33	66		0.997452
497		66		33	0.997452
509		33		66	0.997452
525	33		66		0.997452
565		33		66	0.997452
617	83		16		0.994512
640			83	16	0.994512
741	66			33	0.997452
742	66			33	0.997452
743	66	33			0.997452
744	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain