SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28621

Length: 1068 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28621

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Putative potassium transporter n=1 Tax=Vicia faba RepID=Q8VX37_VICFA	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	42%
Blast2go	potassium transporter	-	-	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	K+ potassium transporter	IPR003855	-	0.0	80%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P149

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is longer than subject: 343 - 225

Fln protein: *TSLKQLCATVLVHFQVSDTYVT*FQLPIGSFQIFSMMLQLTKQKM*A*KFNSDRCFDIGTAGGTFALYSLICRYAKVSLFPNQQPSDAHISSFRLKLPTPELERSLKIKECLEKHSVLKTLLLLLVQVGASMLIVDGILTPAISVTSAMSGLTEPVHGFSKEAAVMASIAFLVILFSIQRFGTSKVGLVYGPVLFIWFLSLGLVGLYNIISYDNSVFKAFNPVYIYYFFSNNPNRAWFSLGGCLLCITGAEAMFADLGHFSVRSVQIAFTFLVFPCLLLAYMGQAAFLITNPSMAERAFYASIPAGAFWPILVLATTAALIASQAMISATFSCIKQSMALG*

Protein Length: 344

Fln nts: TAGACAAGTCTAAAACAGCTATGTGCCACAGTTCTTGTTCATTTTCAAGTGTCAGACACTTATGTGACATAGTTCCAACTTCCCATTGGTTCCTTTCAAATATTTAGCATGATGCTTCAACTTACAAAACAAAAGATGTAGGCCTAAAAGTTTAATTCTGATAGATGCTTTGACATTGGTACTGCAGGTGGCACGTTTGCATTATATTCTCTAATCTGCAGGTATGCAAAGGTCAGTTTGTTCCCTAACCAGCAGCCATCAGATGCACATATTTCAAGTTTTAGGCTCAAGTTGCCTACACCAGAGCTGGAAAGATCCCTGAAAATCAAGGAGTGCTTAGAGAAACATTCAGTACTGAAAACTCTGTTGCTACTTTTAGTTCAGGTTGGAGCTTCTATGCTGATAGTAGATGGCATCCTTACCCCTGCAATTTCAGTCACATCAGCTATGAGTGGGCTGACAGAGCCTGTTCACGGTTTTAGCAAAGAAGCGGCTGTGATGGCATCTATTGCGTTTCTTGTAATCTTGTTCAGCATACAGAGGTTTGGCACGAGCAAAGTGGGACTTGTTTATGGCCCAGTTCTATTCATATGGTTTCTTTCCCTTGGGTTGGTTGGTCTCTACAACATTATTTCATATGACAATAGTGTTTTCAAGGCGTTCAATCCAGTCTATATCTATTACTTCTTTTCGAATAATCCAAATCGAGCATGGTTTTCTCTTGGAGGCTGTTTGTTGTGCATAACAGGAGCTGAAGCAATGTTTGCTGACTTGGGTCACTTCTCAGTGAGGTCTGTCCAGATAGCCTTCACATTTTTGGTGTTCCCATGTCTGTTACTGGCATATATGGGCCAAGCTGCATTTCTTATAACAAATCCAAGCATGGCAGAACGGGCATTCTACGCTTCAATTCCAGCTGGTGCGTTCTGGCCAATTCTTGTGCTAGCCACTACTGCTGCTCTGATCGCAAGTCAAGCTATGATTTCAGCAACATTTTCATGTATCAAACAGTCAATGGCTCTTGGTTAG___ACTTACCCCAAGGCTTAAAGTCATACACACCTCAAAGCG

Fln Alignment:

sp_v1.1_unigene28621___GGTFALYSLICRYAKVSLFPNQQPSDAHISSFRLKLPTPELERSLKIKECLEKHSVLKTXXXXXVQVGASMLIVDGILTPAISVTSAMSGL
A9P149_______________GGTFALYSLLCRHAKVNTIPNQDRTDEELTTYS-RQTIKDKSFAARTKKWLEGKVYRKNALLLLVLIGTCMVIGDGIFTPAISGHASLSSI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain