SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28278

Length: 1028 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28278

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	E2Fa2-2; transcription factor E2F	-	-	3.0e-13	50%
FL-Next	Isoform 2 of Transcription factor E2FA OS=Arabidopsis thaliana GN=E2FA	-	-	0.0	35%
Blast2go	transcription factor e2f	-	-	6.64521e-18	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	E2F Family	IPR015633	-	6.64521e-18	67%

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
52		20	80		0.995493
55	20	20			0.99255
61	80	20			0.995493
66	80	20			0.995493
69	80			20	0.995493
70		20	80		0.995493
72	80	20			0.995493
76	20			80	0.995493
104	87	12			0.992554
105			12	87	0.992554
107	87	12			0.992554
108			12	87	0.992554
111		12	87		0.992554
115		87	12		0.992554
116			12	87	0.992554
119		87	12		0.992554
120			87	12	0.992554
121		12	87		0.992554
123		12		87	0.992554
126	12			87	0.992554
144		87		12	0.992554
224		75		25	0.996473
628			10	90	0.90298
629		10		90	0.90298
635		10		90	0.90298
704	12		87		0.992554
728	28			71	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain