SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28091

Length: 1440 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28091

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Kinesin-related protein n=1 Tax=Gossypium hirsutum RepID=A4GU96_GOSHI	-	-	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	32%
Blast2go	protein	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	microtubule binding	GO:0008017	Molecular Function	0.0	84%
Blast2go	ATPase activity	GO:0016887	Molecular Function	0.0	84%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Kinesin, motor domain	IPR001752	-	0.0	84%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ACB2

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 303 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 150 - 509

Fln protein: MIEIYNEQVRDLLATDGSNRRLEIRNNSQQNGLNVPDANLVSVTSTFDVINLMNIGQKNRVVGATALNDRSSRSHSVLTVHVQGTDLTTGSILRGCLHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGGCHCCTCTKEFTCPLSE*

Protein Length: 151

Fln nts: TGAAGTAGAACAGTTCCAAAGTAATCGAAGCACTGAAAAACAAAGGATGAAGGTTGGAGTATCACCATTGCATTCACATAGGCAAAGCAGAGATATTCAAGCACTGTCAAACCGTAGACAGCCAATGGAAGAGGTTGGAAACATAGAGGTTAGAAGCAGTTCCACCGGAAGGCAGAGGAAACCAATCTATGGCAGGGATGTTTTAGGGGAGGGCGCTGATGCAAATTCTCCAAGACCAATCCGTCGATCTTCTCCAGAGAGAAGATCGTTATCTGTTGAAAGGAGATCATTGTCTGCTGATCGTGGAAATCACATAAGGAACAGAGTTAAGCATGATCCATTGGAAGAACAAGAAGTAAGAAAGTGGCAAGACAAGGTGACGGTCAATAAATATTTAACAATTCACACAGCAGCTTCACAGGATGATTCCTTGAGACCAATGGAAGCTTGTGAATTAGCAAAGCAAGACAGCATTTCTGATATGTTCTACCAAAGGTGCCATGCTAATCCAAGGAAAATATATCCAGAGAGAGAAGACAGACAATTCTCGATGGATCACAATGAAGGGTATGGAGGAGTAAAGAGGAATAAAGTTGATGTAAAAGGGAAGAATGAATATCAAGTGCGAAGAACTCCTCACCATGAAACATCAAATACAGATGAATCAGATGTAGATCTGTTTCGAACTAGTGATTTCTCTGAAGCAGATTTGTTGCAATTTAAGGAACTTAATCTTATTGACGTAGCTCCCATACAACATGTTCCACGAATCAGAAAGACAATGCAATCCTCTACAAGGACCACTCATCACATAGAGCGGAGAAGTCCAATCCAAGCAAAAAGCCCTTCTTCAGCAAGCAGATTTGAAATCTCTAAAAGAGGACGGATGTGTTCACGTATCACGTTGGAGTTCAA_-_ATGATAGAGATATATAATGAGCAAGTGAGAGATCTTCTTGCCACGGACGGTTCCAACCGGAGGCTAGAAATCCGCAACAATTCTCAGCAGAATGGACTCAATGTACCCGATGCAAATTTGGTATCAGTTACATCCACATTCGACGTTATCAATTTGATGAACATTGGACAAAAGAATCGTGTCGTTGGAGCAACTGCTTTGAATGATCGTAGCAGTCGTTCACACAGTGTTTTGACAGTGCATGTCCAAGGAACAGATTTGACCACAGGGTCCATCCTTCGAGGATGCCTTCATTTGGTGGACCTTGCTGGAAGTGAGAGGGTAGATAAATCTGAGGCTACAGGAGACCGGTTGAAGGAAGCCCAACACATCAATAAATCCCTTTCAGCCCTAGGGGGATGTCATTGCTGCACTTGCACAAAAGAGTTCACATGTCCCTTATCGGAATAGCAAGCTAACACAGTTACTTCAAGATTCCTTAGGGGGACAGGCAAAAGCTCTTATGTTTGCCCATATAAGTCCTGA

Fln Alignment:

sp_v1.1_unigene28091___YHVGVQMIEIYNEQVRDLLATDGSNRRLEIRNNSQQNGLNVPDANLVSVTSTFDVINLMNIGQKNRVVGATALNDRSSRSHSVLTV----HVQGTDLTTGSILRGCLHLVDLAGSER-VDKSEATGDRLKEAQHINKSLSALGGC
D5ACB2_______________FRLWLSFFEIYGGKLYDLL---GDRRKLCMREDARQQ-VCIVGLQEFEVSDIQCVKEYIEKGNGARSTGSTGANEESSRSHAILQLTIKKHGEGKELKGGRTV-GKLSFIDLAGSERGADTTDNDRQTRMEGAEINKSLLALKEC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain