SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28084

Length: 728 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene28084 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB	-	-	4.99997e-41	81%
FL-Next	tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	81%
Blast2go	auxin efflux carrier component	-	-	3.92125e-41	90%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Auxin efflux carrier	IPR004776	-	3.92125e-41	90%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
654		25		75	0.996473
655	75	25			0.996473
656		25		75	0.996473
658	75			25	0.996473
673			66	33	0.997452
674		66	33		0.997452
675	33	66			0.997452
676	66		33		0.997452
682	66	33			0.997452
684	66		33		0.997452
687	33			66	0.997452
691		66	33		0.997452
693	66	33			0.997452
695	66	33			0.997452
696		66	33		0.997452
698		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain