SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28060

Length: 1606 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28060

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphoenolpyruvate carboxylase n=1 Tax=Ricinus communis RepID=A6YM33_RICCO	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	97%
Blast2go	phosphoenolpyruvate carboxylase	-	-	88%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoenolpyruvate carboxylase.	EC:4.1.1.31	-	0.0	88%

Source	KEGGs	Term	Identity
Blast2go	Pyruvate metabolism	00620	88%
Blast2go	Methane metabolism	00680	88%
Blast2go	Carbon fixation in photosynthetic organisms	00710	88%
Blast2go	Carbon fixation pathways in prokaryotes	00720	88%
Blast2go	Metabolic pathways	01100	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	phosphoenolpyruvate carboxylase activity	GO:0008964	Molecular Function	0.0	88%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQ37

Fln msg: your sequence is shorter than subject: 327 - 1073

Fln protein: AWELYKAQEDVVAACKEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLAQTAVRQLEIYTTAVLLATLHPPDPPRSMNWRGVMEKISETSRQYYRSTVYENEQFLEYFREATPEAELGNLNIGSRPTRRKKSSEIGHLRAIPWIFAWTQTRFVLPAWLGVGAGLEAACAKGYKEELQAMYREWPFFQCTIDLIEMVLAKSDLSIAKHYDEVLVSPSRQKLGEELREAFCMTEKYVLLVSGHEKLTENNKSLKRLIESRLPFLNPINMIQVEILRRLRRDVNNPKLRDALLITINGIAAGMRNTG*

Protein Length: 328

Fln nts: CTGCATGGGAATTATATAAAGCACAGGAAGATGTTGTAGCTGCTTGTAAAGAATTTGGCATTAAAGTTACCCTATTCCATGGCCGTGGAGGAAGTATTGGGCGTGGTGGTGGACCTACATATCTTGCCATTCAATCTCAACCGCCTGGTTCTGTCATGGGAACTCTCCGATCGACAGAGCAGGGAGAAATGGTCCAGGCAAAGTTTGGCTTGGCACAAACAGCAGTGCGACAACTAGAAATCTACACAACTGCTGTTTTGCTCGCAACTTTACATCCGCCAGATCCACCTCGTAGTATGAATTGGCGAGGGGTAATGGAAAAGATATCAGAAACCAGTCGGCAATATTATAGAAGCACTGTTTATGAAAATGAACAGTTTTTAGAGTACTTCCGTGAAGCCACTCCTGAAGCAGAGCTTGGTAATCTAAATATTGGAAGCCGTCCAACAAGGAGGAAAAAGTCTTCTGAGATTGGGCATCTCCGTGCAATTCCTTGGATATTTGCATGGACACAAACCAGATTTGTTTTACCTGCATGGCTTGGTGTTGGAGCAGGCCTCGAAGCAGCCTGTGCAAAAGGATACAAAGAAGAATTACAAGCCATGTACAGAGAATGGCCATTTTTTCAATGCACAATTGATTTAATTGAAATGGTACTTGCAAAGTCAGATTTATCCATTGCTAAGCACTATGATGAAGTTTTGGTGTCTCCTAGTAGACAGAAGTTAGGTGAAGAGTTGCGAGAAGCCTTTTGCATGACAGAGAAGTATGTGTTGCTCGTTAGTGGTCACGAAAAACTTACGGAAAACAACAAAAGTTTGAAGCGTTTGATTGAAAGCAGACTTCCTTTTTTAAATCCCATTAACATGATCCAAGTGGAGATATTGCGTCGTCTGCGAAGAGATGTGAATAACCCCAAACTTCGTGATGCATTGCTTATCACCATCAATGGTATAGCTGCAGGCATGAGGAACACTGGCTGA___GCAGCTTGTTTAGGGATGCCACTGTTTAATGATTCAAATGAGTATGCATGTATGCATGTGTGCATCCCACGTCGGAATATACCCTATTCAGATTGATATTTGTATAAGGTACAGAAAGCAAGCAGTGTGGTGTGACATTTCTTCAAGCAAGCGCATTGGACTGATACTGGTAGGCTGAGTTTAAGACGGAATGGAAGATTGGTCAATAAAATTTGCGCTGGGCAGAAACTAAAAGAAAAGTGTGTACTTTTCTTTGCTGAAAAGGGAATGAAAAGATAGCGAGTGAACTTTTGTTTGATGGAGCTTAAGCAGCTGGCAATTAAGAAAATTGAGTTCTAATTTTGTTGTGCACTGTCCTGGATATCAGTGCTTTTGTATTATAGGAGTAATATGTTTAGTGCAAGTTTTGAACTTACATGACTACATAATGTTACATGACTATATAATGTTCATATTGGGAAGCAAGAAATGGTTTTTCAAGACAAGATGTACTTCAAATATTGTTTGAGGCTGTTGCATGTTCCTGTCAAGATGCTTCGTGTTAACCACTATATATTAACAACCGCAGCGTATTGTAGATTTGCCGTGTTAACCACTATATATCGTGTTCAATCTCAAAAAAA

Fln Alignment:

sp_v1.1_unigene28060___AWELYKAQEDVVAACKEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLAQTAVRQLEIYTTAVLLATLHPPDPPRSMNWRGVMEKISETSRQYYRSTVYENEQFLEYFREATPEAELGNLNIGSRPTRRKKSSEIGHLRAIPWIFAWTQTRFVLPAWLGVGAGLEAACAKGYKEELQAMYREWPFFQCTIDLIEMVLAKSDLSIAKHYDEVLVSPSRQKLGEELREAFCMTEKYVLLVSGHEKLTENNKSLKRLIESRLPFLNPINMIQVEILRRLRRDVNNPKLRDALLITINGIAAGMRNTG
C0PQ37_______________AWELYKAQEDVVAACKEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSLMGTLRSTEQGEMVQAKFGLAQTAVRQLEIYTTAVLLATLHPPDPPRSANWREVMEKISEISRQYYRSTVYENEQFLEYFREATPEAELGNLNIGSRPTRRKKSSGIGHLRAIPWIFAWTQTRFVLPAWLGVGAGLEAACAKGYKEELQAMYREWPFFQCTIDLIEMVLAKSDISIAKHYDEVLVSPCRQKLGGELREAFCMTEKYVLLVSGHEKLTENNKSLKRLIESRLPFLNPINMIQVEILRRLRRDVNNPKLRDALLITINGIAAGMRNTG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain