SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene28009

Length: 992 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene28009

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Seipin domain containing protein	-	-	6.0e-27	35%
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	47%
Blast2go	protein	-	-	1.86825e-30	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Adipose-regulatory protein, Seipin	IPR009617	-	1.86825e-30	59%

Full-Lengther Next Prediction

SNPs (tot: 37)

Position	A %	C %	G %	T %	Probability
335	66			33	1.0
338	66	33			1.0
340	66			33	1.0
341	66			33	1.0
342		66	33		1.0
343	66		33		1.0
344	66	33			1.0
345			66	33	1.0
346	66		33		1.0
350		33		66	1.0
352		33		66	1.0
353	33			66	1.0
374		33	66		1.0
378	81		18		0.999994
380	81		18		0.999994
382	81	18			0.999994
383		18		81	0.999994
386	81		18		0.999994
387	81		18		0.999994
388		18		81	0.999994
389	81			18	0.999994
391		81		18	0.999994
393	18			81	0.999994
394		18		81	0.999994
754	11		88		0.923564
801	80			20	0.995493
802	80	20			0.995493
803	80		20		0.995493
804	80	20			0.995493
805	20		80		0.995493
808			20	80	0.995493
809	20			80	0.995493
810		80	20		0.995493
813	25		75		0.996473
814	75	25			0.996473
817	75		25		0.996473
819		25	75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain