SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene27922

Length: 1539 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene27922

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Annexin P35 n=1 Tax=Elaeis guineensis RepID=B3TLY9_ELAGV	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	protein	-	-	77%

Source	InterPros	Term	Type	Identity
Blast2go	Annexin	IPR001464	-	77%
Blast2go	Annexin, plant	IPR009118	-	77%
Blast2go	Annexin repeat, conserved site	IPR018252	-	77%
Blast2go	Annexin repeat	IPR018502	-	77%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NNL2

Fln msg:

Fln protein: MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQTYTQLYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAHESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKTLEHAIAVDTSGDYEELLLTLIGKQQS*

Protein Length: 318

Fln nts: ATTTTCTAAATCAGCGTCGACTCCACTGAATGACGCGTTTCCTGCAATTTTATACGTTTTCCATTTAGTCCGATCACATTCGAATATTATAGTCCCATCTTGGAATCTGATGCTCATATAAAATAGGAAGACGCTGTTGCAGTTTCTGTGAAAAAAAAGGTTCATCGGAGATATTGTGGGAGAAGAGACCAAAGGATATATTGTGGGAGAAGAGATCAAATCAAGTCTTGTTGTAAGAG_-_ATGTCAACAATTATAGTGCCAGCGCCAGCTCCATCCCCAGTTGAAGACTCTGAGCGCCTCAGGAAGGCCTTTGAAGGCTGGGGCACAAATGAGAAGTTGATTATAGAAATTTTGGGACACAGAACCGCAGCACAGCGCAGAGCAATCAGGCAAACGTACACTCAGTTGTATGAGGAAGATTTCCTGAAGCGATTGCAATCAGAACTCACACGGGATTTTGAGAGAGCTCTGCTCCTCTGGTCACTGGATCCCCCAGAACGAGATGCACTTTTAGCCCATGAATCTATAAAGAAGTGGAGTCCAAATAACAGGTCACTTCTGGAAATCTCTAGTGCTCGATCTTCAACTGAGCTGTGGTCGGTCAGACAAGCATATCATATACGTTACAAGAAATCTCTGGAAGAAGACGTTGCTTCTCATACTCATGGAGACTTCCGCAAGCTACTAGTTCAACTTGTAAGTTCTTACCGATATGAAGGTCCAGAAGTGGATACGCGCTTGGCAAAATCTGAAGCTAAGCAATTACATGAAGCTATAAAGGACAAGGCTTTCGGTAACGAGGAACTCATTCGCATAATAACTACAAGGAGTAAGGCACAGTTGAATGCCACTTTCAATTATTACAAAGATGACTATGGTCATCATATCAACAAGGACTTGAAGAATGGGAAGCCAGAAGACTTCCTAGAGTCACTACGAATTGTTATCAAATGCATTTGCTTTCCTGAAAGATACTTTGCAAAGGTTTTGAGGTTGGCAATAGATAAACTTGGGACGGACGAAGAAGCCCTTATGCGAGTGGTGGTGACTCGTGCTGAGACTGACCTGAGTAATATCAAAGAAGAATACCGCAAAAGAACTAGCAAAACATTAGAGCATGCAATAGCGGTGGATACCTCTGGAGACTACGAAGAATTGCTGCTTACTTTGATAGGCAAACAGCAATCCTAA___GCTCATTTTTCTCTGTCAGTCAGGGAACCTCTGTTAGATTAGTTAAATATAGTTGATCATAACGGTGACAGAACTCTATCTGCTATCTATAAGCTAGAGTTTTATACATGTCTGCGGAATAAGGATCATTTGTCTGCTGTATTTAGAGGCACTGACTACATTATAGCTTTTAGTTAGAACTTAAAATATGTTTGTGTTCGTATGGAATTTTACTTGTGTCTACGACCATATTTTTGGTGAAATTATGCAAATCCCACCTCTGTGCTTAGCTTTGTATTCAGCTTTGTATTCAATGGGTGGCATTCACACTATTGTTCCCAACAAGCAATGAGAGAAGTTGCATAGCTCC

Fln Alignment:

sp_v1.1_unigene27922___MSTIIVPAPAPSPVEDSERLRKAFEGWGTNEKLIIEILGHXXXXXXXXXXXXXXXLYEEDFLKRLQSELTRDFERALLLWSLDPPERDALLAHESIKKWSPNNRSLLEISSARSSTELWSVRQAYHIRYKKSLEEDVASHTHGDFRKLLVQLVSSYRYEGPEVDTRLAKSEAKQLHEAIKDKAFGNEELIRIITTRSKAQLNATFNYYKDDYGHHINKDLKNGKPEDFLESLRIVIKCICFPERYFAKVLRLAIDKLGTDEEALMRVVVTRAETDLSNIKEEYRKRTSKTLEHAIAVDTSGDYEELLLTLIGKQQS
A9NNL2_______________MSTIIVPTPTPTPVEDSESLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQAYTQLYEEDFLKRLQSELTREFERALFLWSLDPPERDALLAHESIKKWSPKNRSLIEISCARSSSELWLVRQAYHVRYKKSLEEDIASHTQGDFRKLLVQLVSSYRYEGPEVDMRLAKSEAKQLHEAIEDKAFGNEEFIRIITTRSKAQLNATFNNYKDEYGHHINKDLKNEKPEEFLESLRVVIKCICFPERYFAKVLRLAIDKLGTEEEALIRVVVTRAETDMNNIKEEYHKRTSKTLEHAIAADTSGYYEEFLLTLIGKEQS

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
1027	87		12		0.993502
1204			7	92	0.999664
1211		7	92		0.999602
1246		7		92	0.999602
1327			8	91	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain