SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene27589

Length: 778 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene27589

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipase_3 domain containing protein	-	-	0.0001	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	phytoalexin-deficient 4-2 protein	-	-	0.0	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LL55

Fln msg: Overlapping hits, possible frame ERROR between 657 and 645, Distance to subject end: 182 aas, your sequence is shorter than subject: 259 - 614

Fln protein: FGCPLVGDERLVQAIGREHWGGNFCHVVSKHDIVPRMLLAPLESISKPLIAVFSYWQGIDVHDTFVQDACRTLLTSVLDSLRESDGIVTKSPYRPFGTYLFCSSNGATCIENPETVLTMLHWTIQSQETSLDEIVQNCLLEHMRYGSFLKNVKQNSIRGRRLVYSNLESSYDMRVSLQLEAIGVEVQDDPVKLAFLSLGKTENTHSVDASNLAIxxxxxxCTRVELEWYKECCERDDIGGYYDSFKNQNDKKDIDANGR

Protein Length: 260

Fln nts: TTTGGTTGCCCTTTAGTGGGAGATGAAAGACTTGTTCAAGCAATTGGCCGTGAGCATTGGGGAGGCAACTTTTGTCACGTGGTGTCCAAACATGATATTGTTCCACGGATGCTCCTTGCACCCTTGGAATCAATTTCTAAGCCCTTAATTGCTGTTTTTTCATATTGGCAGGGCATAGATGTACATGATACTTTTGTTCAAGATGCTTGTAGGACGCTTCTTACTAGTGTCCTTGATTCTCTAAGGGAGTCAGATGGGATTGTCACGAAAAGCCCTTACAGGCCCTTTGGCACTTATCTGTTTTGCTCAAGCAATGGTGCCACTTGCATTGAAAATCCTGAGACAGTTTTGACGATGCTTCACTGGACAATACAAAGCCAAGAAACTTCTTTGGATGAGATTGTACAGAACTGCCTTTTAGAGCACATGAGGTATGGTTCTTTCTTGAAGAATGTCAAACAAAATTCCATAAGAGGGAGAAGACTGGTGTATTCCAATTTAGAATCCTCTTACGATATGAGAGTTTCATTGCAGCTAGAAGCTATTGGTGTTGAAGTTCAGGATGATCCTGTAAAGCTGGCCTTCCTAAGCCTTGGCAAAACTGAAAACACACACAGCGTAGATGCTTCCAACCTAGCCATTxxxxxxxxxxxxxxxxxxTGTACCAGGGTTGAGCTCGAGTGGTATAAAGAATGTTGCGAGAGGGATGACATTGGTGGATATTATGATTCCTTCAAGAACCAAAATGACAAGAAGGATATCGATGCTAATGGGCGTAG

Fln Alignment:

sp_v1.1_unigene27589___FGCPLVGDERLVQAIGREHWGGNFCHVVSKHDIVPRMLLAPLESISKPLIAVFSYWQGIDVHDTFVQDACRTLLTSVLDSLRESDGIVTKSPYRPFGTYLFCSSNGATCIENPETVLTMLHWTIQSQETSLDEIVQNCLLEHMRYGSFLKNVKQNSIRGRRLVYSNLESSYDMRVSLQLEAIGVEVQDDPVKLAFLSLGKTENTHSVDASNLAIKxxxxNCTRVELEWYKECCERDDIGGYYDSFKNQNDKKDIDANGR
B8LL55_______________FGCPLVGDERLVEAVGREHWGGNFCHVVSKHDIVPRMLLAPLESIAQPLIAIFPYWQGIDAPDAFIQDACRTLLNNVFDSLRESNGVVKKSPYRPFGTYMFCSSNGAACIENSETVLKMLHWTIQSQETSLDEIVQDCLLEHIRYGSVLKIVMQNSIRGRKLVNFNSESSYEMRISLQLEAVG--VQDDHVKLDLLNLGRTENKHSADVSNLAIKxxxxNCTRVELEWYKECCEKDDIGGYYDSFKNQNDKRDIDANGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain