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Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PQE2

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 22 aas, your sequence is shorter than subject: 169 - 1071

Test code: 0

Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.

Fln protein: PDTTPTLLKSRAQRSLMLEAEAVLTC*NL*W*PATASQKVAEGFHLCVCFKLQRLPDSLSGLTSLQTLDLSGCSQLQSLPASLRRLTSVQSAAAPRFHWQLDEPPNSLLTRQRLPNSLGSLTNLQTLHLFGCSLPEAPKFLWWLDEPPNPSLFRCYELPRGSQIPLGS*

Protein Length: 170

Fln nts: ACCCCGATACTACTCCAACACTGTTAAAGAGTCGAGCGCAGCGCTCTTTAATGTTGGAGGCAGAAGCGGTTTTGACATGTTAAAACTTATAATGGTGACCAGCAACAGCTTCTCAAAAGGTTGCGGAAGGTTTTCACTTGTGTGTCTGCTTTAAGTTGCAGAGGCTCCCAGATTCCCTTAGCGGGTTGACGAGCCTCCAAACTCTCGACTTATCTGGCTGCTCCCAGCTGCAGAGTCTCCCAGCTTCGCTTCGCAGATTGACCAGCGTCCAATCTGCGGCGGCTCCCAGATTCCATTGGCAGCTTGACGAACCTCCAAACTCTTTATTGACCCGCCAGAGGCTCCCAAATTCCCTTGGCAGCTTGACGAACCTCCAAACCCTTCACTTATTCGGCTGCTCCTTGCCAGAGGCTCCCAAATTCCTTTGGTGGCTTGACGAACCTCCAAACCCTTCACTCTTCCGCTGCTACGAGCTGCCGAGAGGCTCCCAGATTCCCTTGGGGTCTTGACGAGTCTCCATCCCTTCACTTGTTCTGCTGCTACCAGCTGAGGCAGCTCCCAGATTCCCTCCTCGACTTGACGAATCCCCAAACCCTTG

Fln Alignment:

sp_v1.1_unigene27426___TASQKVAEGFHLCVCFKLQRLPDSLSGLTSLQTLDLSGCSQLQSLPASLRRLTSVQSAAAPRFHWQLDEPPNSLLTRQRLPNSLGSLTNLQTLHLFGCS
C0PQE2_______________TGLQTLALGW----CSTLQTLPDSVGNLTGLQTLDLIECSTLQTLPDSVGNLTGLQTLYLSR-----------CSTLQTLPDSVGNLTGLQTLYLSGCS