SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene27387

Length: 919 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene27387

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mitochondrial import receptor subunit TOM7-1 n=2 Tax=Andropogoneae RepID=B6SJR3_MAIZE	-	-	5.0e-15	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	mitochondrial import receptor subunit tom7-1	-	-	4.23148e-18	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	4.23148e-18	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mitochondrial outer membrane translocase complex, subunit Tom7	IPR012621	-	4.23148e-18	88%

Full-Lengther Next Prediction

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
139	6		93		0.99903
140	3		9	87	1.0
142	90		3		0.996531
144			6	93	0.99903
145		3	6	90	0.996531
161			5	94	0.998397
163		94	5		0.998397
346	93		1		0.999965
764		87		12	0.992554
774	12		87		0.992554
794	14		85		0.993533
796	16		16		0.988813

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain