SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene27060

Length: 1086 nt

Origin of reads: Biogeco_1 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene27060 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ankrd39, MGC154403; ankyrin repeat domain 39	-	-	2.0e-32	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	ankyrin repeat domain 39	-	-	0.0	63%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ankyrin repeat	IPR002110	-	0.0	63%
Blast2go	Ankyrin repeat-containing domain	IPR020683	-	0.0	63%

Full-Lengther Next Prediction

SNPs (tot: 81)

Position	A %	C %	G %	T %	Probability
408	11	88			0.923564
409	11	88			0.923564
411	88		11		0.923564
412		88		11	0.923564
416	88		11		0.923564
418	88	11			0.923564
422			12	87	0.992554
423	12			87	0.992554
424		87	12		0.992554
426	87		12		0.992554
427	87		12		0.992554
428		12		87	0.992554
430		12	87		0.992554
431	12			75	0.975346
432		87	12		0.992554
433		12		75	0.975346
435	25			75	1.0
436	25			75	1.0
440		28		57	1.0
441	85		14		0.993533
443	71		28		1.0
444	85		14		0.993533
445	57	28		14	1.0
447	20			80	0.995493
449	20	80			0.995493
450		80	20		0.995493
451		20		80	0.995493
452		20		80	0.995493
454	20			80	0.995493
455			20	80	0.995493
459	20			80	0.995493
466			20	80	0.995493
476		25		75	0.996473
478	25		75		0.996473
549			50	50	1.0
550		50	50		1.0
551	50	50			1.0
552	50		50		1.0
554		50	50		1.0
556		50	50		1.0
559		50		50	1.0
561	50			50	1.0
562	50			50	1.0
564	50		50		1.0
565			50	50	1.0
570	25		50	25	0.995533
574	50		50		1.0
904	85	14			0.999981
906	14			85	0.999981
907			14	85	0.999981
911		14		85	0.999981
912			14	85	0.999981
913	14	85			0.999981
915			14	85	0.999981
975		90	10		0.90298
982	10			90	0.90298
983			10	90	0.90298
984		10		90	0.90298
986	10	90			0.90298
988	90		10		0.90298
993		90	10		0.90298
994	11		55		1.0
996			11	88	0.923564
997			37	62	1.0
1000		62		37	1.0
1001			37	62	1.0
1002	37			62	1.0
1003		37		62	1.0
1007	62	37			1.0
1008	37		62		1.0
1009	37	62			1.0
1011			37	62	1.0
1014	37			62	1.0
1015		37	62		1.0
1016			37	62	1.0
1018		37	62		1.0
1068		25		75	0.996473
1069		25		25	0.995533
1070		25	75		0.996473
1071	75	25			0.996473
1072	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain