SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26593

Length: 540 nt

UniGene Fasta

>sp_v1.1_unigene26593
AATGTTTTGGCAGTTGATGGTAGAAGGAATGAGCTCATATGGAGATGGCTATGAGATTGTCTTGTCTCAGAACCCATCAACAGCAGCTCTCATTTCTGGTCAGTCTCAAAAACTGGCTGAGCTTACTCGTTTGTTCACGAGACTATATGAGTTTGAGAAGAATCAGGTCCATGCATATAGAAGGGTAAGATGGCACTGGGAATCGATCAAAGGCTGAGATTGATAGTAAAATTTGCGCACATATTTGGTGATTAGAGTGATAGGTGCTGTATGTTTGCTCTGAGTCCTCTTAGGTATCAGTGAAAACTGAAGCGACCAGAGCTCAGTGATAAAAATTATGAATATGGCCAATATAGAATAAACAAGTTAAGTTATTGTTGAATTGAATCCTGGCTTTCCAGTGCAAGAAATGAGAAATGCAAACCAAACTAGCGGGTGGGGGCGAGGCGTATTTTACTCCACGAGATGGCAACATTCTATAACGTCCATTGGTCATTTCTCTATTCCATGTATGTGTGATTAGGTGCCCCACAGAAGACT

Ace file of the UniGene sp_v1.1_unigene26593

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	hydrolase, hydrolyzing O-glycosyl compounds, putative	-	-	1.0e-10	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	unknown [Picea sitchensis]	-	-	1.76452e-23	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	1.76452e-23	75%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5A8H8

Fln msg: atg_distance in limit (1-15): atg_distance = 1,

Fln protein: MFWQLMVEGMSSYGDGYEIVLSQNPSTAALISGQSQKLAELTRLFTRLYEFEKNQVHAYRRVRWHWESIKG*

Protein Length: 73

Fln nts: A_-_ATGTTTTGGCAGTTGATGGTAGAAGGAATGAGCTCATATGGAGATGGCTATGAGATTGTCTTGTCTCAGAACCCATCAACAGCAGCTCTCATTTCTGGTCAGTCTCAAAAACTGGCTGAGCTTACTCGTTTGTTCACGAGACTATATGAGTTTGAGAAGAATCAGGTCCATGCATATAGAAGGGTAAGATGGCACTGGGAATCGATCAAAGGCTGA___GATTGATAGTAAAATTTGCGCACATATTTGGTGATTAGAGTGATAGGTGCTGTATGTTTGCTCTGAGTCCTCTTAGGTATCAGTGAAAACTGAAGCGACCAGAGCTCAGTGATAAAAATTATGAATATGGCCAATATAGAATAAACAAGTTAAGTTATTGTTGAATTGAATCCTGGCTTTCCAGTGCAAGAAATGAGAAATGCAAACCAAACTAGCGGGTGGGGGCGAGGCGTATTTTACTCCACGAGATGGCAACATTCTATAACGTCCATTGGTCATTTCTCTATTCCATGTATGTGTGATTAGGTGCCCCACAGAAGACT

Fln Alignment:

sp_v1.1_unigene26593___MFWQLMVEGMSSYGDGYEIVLSQNPSTAALISGQSQKLAELTRLFTRLYEFEK-NQVHAYRRVRWHWESIKG*D
D5A8H8_______________MFWQLMVEGMSSYGDGYEIVLSQNPSTASIISAQSHKLAELTHMFTRMYEYEKWRHVHEHSRAKWHMGSIRGLD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain