SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26571

Length: 1191 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene26571

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L30, putative; K02908 large subunit ribosomal protein L30e	-	-	5.60519e-45	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	60s ribosomal protein l30	-	-	0.0	95%

Source	InterPros	Term	Type	Identity
Blast2go	Ribosomal protein L30e	IPR000231	-	95%
Blast2go	Ribosomal protein L7Ae/L30e/S12e/Gadd45	IPR004038	-	95%
Blast2go	Ribosomal protein L30e, conserved site	IPR022991	-	95%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
99	85		11	2	1.0
100	8	2		41	1.0
101	55	14	29		1.0
102	67		29	2	1.0
103	58	14	23	2	1.0
104			26	73	1.0
105	79		8		1.0
107	11	2		85	1.0
423		22		77	1.0
559	10	5		70	1.0
605	89			10	1.0
756	7		92		0.999602
874	21	7		71	1.0
875	15	7		69	0.999985
877	7	23		38	1.0
880	9		45	45	1.0
881	10		90		0.90298
882			50	50	1.0
883	57			42	1.0
885	42		57		1.0
886			42	42	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain