SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26549

Length: 958 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene26549

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Aspartic proteinase nepenthesin-2, putative n=1 Tax=Ricinus communis RepID=B9SD00_RICCO	-	-	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	aspartic proteinase nepenthesin-2	-	-	61%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane	GO:0016020	Cellular Component	0.0	61%
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	61%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC09

Fln msg: your sequence is shorter than subject: 314 - 370

Fln protein: SELLCGNCTGSLMNCSQTCPPYGILYGMGSTVGLLLTETLNLPLENGEGARAITNFAVGCSIVSSQQPSGIAGFGRGALSMPSQLSEHIGKDIFAYCLQSHRFDEENQKSLMVLGDKAFPKGIPLNYTPFLTNYRAPPSSQYGVYYYIGLRAVSIGGKRVKLPSKLLRFDTKGNGGTIIDSGTTFTVFHDEIFKHIAAGFASQIEYRRAVDVEALTGMGLCYNVSGLENIVLPEFAFHFKGGSDMVLPVANYFSYFSSFDSICLTMISSRGLLEIETGPAVILGNDQQQDFYLLYDRVKNRLGFSQQTCKTFV*

Protein Length: 315

Fln nts: ACTCTGAGCTCCTGTGTGGGAATTGCACAGGAAGCCTCATGAACTGCTCTCAGACTTGTCCGCCCTATGGAATTCTGTATGGCATGGGAAGCACCGTAGGGCTTCTCCTGACGGAGACCTTGAATTTACCATTGGAAAATGGAGAAGGGGCACGAGCAATCACCAACTTTGCAGTGGGATGTTCAATAGTTTCATCCCAGCAACCTTCTGGTATTGCAGGATTTGGCAGAGGAGCTCTGTCTATGCCTTCCCAGCTTAGTGAACACATTGGCAAAGATATATTTGCGTATTGCCTTCAGAGCCACCGATTCGACGAAGAAAACCAGAAAAGCCTTATGGTTCTCGGTGACAAGGCGTTCCCCAAAGGCATCCCTCTGAATTACACGCCGTTTTTAACCAATTACAGAGCACCCCCTTCTTCTCAATATGGAGTATACTATTACATCGGTCTCAGAGCGGTGAGTATTGGTGGAAAACGCGTGAAGCTGCCTTCTAAGTTATTGAGATTCGACACCAAAGGCAATGGAGGAACCATAATAGATTCCGGCACTACTTTCACTGTCTTTCATGATGAAATCTTCAAGCATATTGCAGCTGGGTTTGCTTCTCAGATTGAGTACAGAAGAGCTGTTGATGTTGAAGCTTTGACTGGTATGGGACTCTGTTACAATGTATCGGGTCTAGAGAATATTGTGTTGCCTGAGTTTGCATTTCATTTCAAGGGTGGCTCAGACATGGTACTCCCTGTTGCCAACTATTTCAGTTATTTTAGCAGTTTTGATTCAATCTGCTTGACAATGATTAGTAGCAGAGGCCTTTTGGAGATTGAGACTGGACCTGCTGTGATACTGGGGAACGATCAGCAACAGGATTTTTATTTATTGTATGACAGAGTGAAAAATCGTTTAGGTTTCAGTCAGCAGACCTGCAAGACGTTCGTGTGA___CTAGCGGACATGTC

Fln Alignment:

sp_v1.1_unigene26549___SELLCGNCTGSLMNCSQTCPPYGILYGMGSTVXXXXXXXXXXXXXXXXXARAITNFAVGCSIVSSQQPSGIAGFGRGALSMPSQLSEHIGKDIFAYCLQSHRFDEENQKSLMVLGDKAFPKGIPLNYTPFLTNYRAPPSSQYGVYYYIGLRAVSIGGKRVK-LPSKLLRFDTKGNGGTIIDSGTTFTVFHDEIFKHIAAGFASQIEYRRAVDVEALTGMGLCYNVSGLENIVLPEFAFHFKGGSDMVLPVANYFSYFSSFDSICLTMISSRGLLEIETGPAVILGNDQQQDFYLLYDRVKNRLGFSQQTCKTF
D5AC09_______________TELLCQSCAGSLKNCSETCPPYGIQYGRGSTAGLLLTETLNLPLENGEGARAITHFAVGCSIVSSQQPSGIAGFGRGALSMPSQLGEHIGKDRFAYCLQSHRFDEENKKSLMVLGDKALPNNIPLNYTPFLTNSRAPPSSQYGVYYYIGLRGVSIGGKRLKQLPSKLLRFDTKGNGGTIIDSGTTFTVFSDEIFKHIAAGFASQIGYRRAGEVEDKTGMGLCYDVTGLENIVLPEFAFHFKGGSDMVLPVANYFSYFSSFDSICLTMISSRGLLEVDSGPAVILGNDQQQDFYLLYDREKNRLGFTQQTCKTF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain