SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26494

Length: 702 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene26494

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Histone H2B n=5 Tax=Andropogoneae RepID=C5WPC5_SORBI	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	histone h4	-	-	95%

Source	InterPros	Term	Type	Identity
Blast2go	Histone H2B	IPR000558	-	95%
Blast2go	Histone core	IPR007125	-	95%
Blast2go	Histone-fold	IPR009072	-	95%

Full-Lengther Next Prediction

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
148	83	16			0.994512
149	83		16		0.994512
152	83		16		0.994512
156	83	16			0.994512
158	83			16	0.994512
343	85	14			0.993533
344	85		14		0.993533
346		14		85	0.993533
348			85	14	0.993533
350	14			85	0.993533
351	85	14			0.993533
354		85	14		0.993533
355			14	85	0.993533
359	85			14	0.993533
412	85	14			0.993533
451		25		75	0.996473
460			20	80	0.995493
463	80			20	0.995493
464		20		80	0.995493
466		20		80	0.995493
467	20		80		0.995493
468	40		60		1.0
470	20		80		0.995493
471	20		80		0.995493
472		80	20		0.995493
474			20	80	0.995493
475	20			80	0.995493
477	20			80	0.995493
478	80		20		0.995493
479	80		20		0.995493
480		20		80	0.995493
481	80	20			0.995493
492	50			50	1.0
613		25	75		0.996473
633	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain