SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26491

Length: 897 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene26491

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D	-	-	3.0e-38	82%
FL-Next	sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	100%
Blast2go	histone h4	-	-	4.59381e-38	98%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	4.59381e-38	98%
Blast2go	chromosome organization	GO:0051276	Biological Process	4.59381e-38	98%
Blast2go	binding	GO:0005488	Molecular Function	4.59381e-38	98%
Blast2go	nucleolus	GO:0005730	Cellular Component	4.59381e-38	98%
Blast2go	vacuole	GO:0005773	Cellular Component	4.59381e-38	98%
Blast2go	plasma membrane	GO:0005886	Cellular Component	4.59381e-38	98%
Blast2go	chromosome	GO:0005694	Cellular Component	4.59381e-38	98%
Blast2go	chloroplast	GO:0009507	Cellular Component	4.59381e-38	98%
Blast2go	thylakoid	GO:0009579	Cellular Component	4.59381e-38	98%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone H4	IPR001951	-	4.59381e-38	98%
Blast2go	Histone core	IPR007125	-	4.59381e-38	98%
Blast2go	Histone-fold	IPR009072	-	4.59381e-38	98%
Blast2go	Histone H4, conserved site	IPR019809	-	4.59381e-38	98%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
344			63	36	1.0
445		4		95	0.99692
446	4			95	0.99692
761		80		19	1.0
796	14		85		0.993533
797	14		85		0.993533
800	14			85	0.993533
803			85	14	0.993533
805	16			83	0.994512
807		16		83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain