SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26276

Length: 346 nt

UniGene Fasta

>sp_v1.1_unigene26276
ATGGGACGAGAAAGAAAGGTCAAAGAAACTATCCTTTCCGCAAGTCACTCTTTTTTGTTTTTTGACAGATTTGAGAGACTTTCCGTTTATGCGTATTTGTTGATGTTATTACAGATATAATATTCCATCAGGAGCTCCTCCTTCGATACGGAGAAGGTAAGGAGATCCTAAATAGCGGCATAAGTGGGAATTATATACAGAAGGGTTTGTGCTTCCTCTGTTTTATATAAGCAGGTAAAGTCGTTTTAAGTTTGAAACCCATGGGCACGCCGGAGACATCTCGAGAGCCATGCCCCGACCGAATTCTGGACGATGTTGGTGGCGCCTTCGGCATGGGGGCGGTGGG

Ace file of the UniGene sp_v1.1_unigene26276

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	mitochondrial import inner membrane translocase subunit Tim17	-	-	6.0e-09	100%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ADU1

Fln msg: Distance to subject end: 224 aas, your sequence is shorter than subject: 28 - 253

Fln protein: MGTPETSREPCPDRILDDVGGAFGMGAV

Protein Length: 29

Fln nts: ATGGGACGAGAAAGAAAGGTCAAAGAAACTATCCTTTCCGCAAGTCACTCTTTTTTGTTTTTTGACAGATTTGAGAGACTTTCCGTTTATGCGTATTTGTTGATGTTATTACAGATATAATATTCCATCAGGAGCTCCTCCTTCGATACGGAGAAGGTAAGGAGATCCTAAATAGCGGCATAAGTGGGAATTATATACAGAAGGGTTTGTGCTTCCTCTGTTTTATATAAGCAGGTAAAGTCGTTTTAAGTTTGAAACCC_-_ATGGGCACGCCGGAGACATCTCGAGAGCCATGCCCCGACCGAATTCTGGACGATGTTGGTGGCGCCTTCGGCATGGGGGCGGTGGG

Fln Alignment:

sp_v1.1_unigene26276___MGTPETSREPCPDRILDDVGGAFGMGAV
D5ADU1_______________MATPDHVREPCPDRILDDLGGAFSMGAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain