SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26205

Length: 1929 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene26205

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Mitogen activated protein kinase 13 n=3 Tax=Pinaceae RepID=C7ENI4_PINTA	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	big map kinase	-	-	91%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NXQ5

Fln msg:

Fln protein: METGAAAVDGHIQGILTHGGQYVQYNIFGNLFEVFSKYIPPIRPIGRGAYGIVCSAVNSETNEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHENIIAIKDIIRPPQRENFNDVYIVYELMDTDLYQIIRSTQPLTEDHCQYFLYQLLRGLKYIHSANILHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCIFMEILKREPLFPGKDYVQQLRLITELIGSPDDSDLGFLRSDNARRYIRQLPQFPKQPFSQKFPNMAPAAVDLLEKMLVFDPSKRITVQEALSHPYLASLHDINDEPSCPTPFNFDFEQPSFTEEHIKELIWRESLNFNPDMMQ*

Protein Length: 374

Fln nts: CACTGAAATCTTTCGCCATTCGACTGTTAGAAAGCACAACGAAGCAGTCGTCAGCTTTTGAATACCAATTCCGTGTGCGATCGGAATCCTCCCTGCCCCTGCATCCTTTGGGCAGCTCGCGGAATAACAAGCCTCTGCTGGTTTGGGGTTCTTGGATGCAGAATTAGAAGACAGCGCC_-_ATGGAAACGGGCGCTGCGGCAGTAGACGGTCACATACAGGGAATTCTGACCCATGGCGGTCAGTATGTGCAGTATAATATCTTTGGGAACCTCTTCGAGGTCTTCTCCAAGTACATCCCCCCCATACGACCTATCGGCCGCGGCGCATATGGCATTGTCTGTTCGGCAGTGAACTCGGAGACAAATGAGGAAGTTGCAATTAAGAAAATTGGCAATGCTTTTGATAACAGAATTGATGCAAAGAGGACTCTTCGCGAAATTAAGCTTCTATGCCATATGGAACATGAAAATATCATTGCAATTAAAGACATCATTCGGCCACCTCAGAGAGAAAATTTTAATGATGTTTATATTGTATATGAGCTCATGGATACAGATCTCTACCAGATTATACGCTCCACTCAACCATTAACAGAGGATCACTGTCAGTACTTCCTATATCAACTATTGAGAGGGCTGAAGTACATACACTCAGCAAACATTCTGCATAGAGATTTAAAACCCAGTAATTTGCTTCTAAATGCAAACTGTGACCTAAAAATATGTGATTTTGGGCTTGCACGGACTACTTCAGAAACGGACTTTATGACAGAGTATGTTGTTACTCGCTGGTATCGTGCACCGGAACTACTATTGAATTGTTCCGAGTATACAGCAGCCATTGATATCTGGTCAGTGGGCTGCATTTTTATGGAGATACTAAAGCGGGAGCCCTTGTTTCCTGGTAAAGATTATGTTCAGCAATTAAGGCTCATCACTGAGTTAATTGGTTCACCAGATGACTCTGATCTTGGATTTTTACGGAGTGACAATGCTAGAAGATACATCAGGCAACTTCCACAGTTTCCTAAGCAACCTTTTTCTCAGAAATTCCCCAACATGGCTCCAGCAGCTGTAGATTTACTTGAAAAAATGCTTGTATTTGATCCAAGCAAACGCATTACAGTTCAAGAGGCCTTGAGTCACCCTTACTTGGCAAGTCTGCATGACATCAATGATGAACCCAGCTGCCCCACTCCTTTCAACTTTGATTTTGAGCAGCCCTCGTTCACCGAGGAACATATAAAAGAGCTCATTTGGAGGGAATCTCTTAACTTCAACCCAGACATGATGCAATAG___CTGGAGCAGACAGGCTTGATATTTATCTTGTGTGGAAACTTGTTTTATTAGAGTTAGGTTTGCTTTTATTCTTTGGTGGTCTGGTAAAAGAAAAGGAATTGATGGATATGCTTACAGATCGATTGTGAAAATTGTGTATTCCTAATCTGAGCCAACTATTGGCCTTTACTTTTATTATCATTGGACATTAAAATGTAACTGGGAAACTTAATAATCTAAAGTAAATGCCGAAGGAATTTGTAAGTTGTCTTGCAAACATGATTTCATACATTTGGATTTGCAAGTGTGACAAATTAGTTGGAAATGGTGCCATCTTTGGCACTAATAACATCGCTTGGTATTTTGTACACAGCACTCTTGAAGAATTATATAATCTGGGAGTTATATCCGTAACTGGAAATTTGGAATATGGGAGTTCGCCGTATGGCTGAAAATTTCAATAATATTTTATTTGGGAGATGGTCGCAGGAGTTGGGGGTCACTTTATTGTGCTCTTCTTTATTGCAATGTATACATTGGTTTTGATGTCCTGTAATTAATTCCTTAACCAATGTATGATTTATGGTGTAGAATTCTCAGTTAATTGGTGGAAATGAACAAGGAAGATTGCTTATGAAAGATATGCCAACACA

Fln Alignment:

sp_v1.1_unigene26205___METGAAAVDGHIQGILTHGGQYVQYNIFGNLFEVFSKYIPPIRPIGRGAYGIVCSAVNSETNEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHENIIAIKDIIRPPQRENFNDVYIVYELMDTDLYQIIRSTQPLTEDHCQYFLYQLLRGLKYIHSANILHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCIFMEILKREPLFPGKDYVQQLRLITELIGSPDDSDLGFLRSDNARRYIRQLPQFPKQPFSQKFPNMAPAAVDLLEKMLVFDPSKRITVQEALSHPYLASLHDINDEPSCPTPFNFDFEQPSFTEEHIKELIWRESLNFNPDMMQ
A9NXQ5_______________MEAGAAAVDGHIQGILTHGGQYVQYNIFGNLFEVSSKYIPPIRPIGRGAYGIVCSAVNTETNEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMEHENIIAIKDIIRPPQRENFNDVYIVYELMDTDLYQIIRSTQPLTEDHCQYFLYQLLRGLKYIHSANILHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCIFMEILKREPLFPGKDYVQQLRLITELIGSPDDSDLGFLRSDNARRYIRQLPQFPKQPFSQKFPNMAPAAVDLLEKMLVFDPSKRITVQEALSHPYLASLHDINDEPSCPTPFNFDFEQPSFTEEHIKELIWRETLNFNPDMMQ

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
1291		9		90	1.0
1294	90		9		1.0
1295	90			9	1.0
1296			9	90	1.0
1298		9	90		1.0
1303	89	2		7	0.999999
1307		7	92		1.0
1308	89			7	0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain