SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene26154

Length: 254 nt

UniGene Fasta

>sp_v1.1_unigene26154
ATGGGGATACTCAGACTTGAGAATATTCACAATTACTTGCTTCCTCGTACAGTCTCTTCGTGAGTGAAAGTTCGAATCACAGCGGTAGCAATGGCGAGAGCGTTGGGAGTTTTGCTTATATTCATGGCAGCGTTATACATTTGCATGCAAGGTGTAAGATGCGCGACATTCGAGATCCAAAACGAGTGCCCGTTCACTGTTTGGGCAGCCGGGATTCCCAACGTTGGAGGGAAACAGCTGGAGCGAGGGCAGTC

Ace file of the UniGene sp_v1.1_unigene26154

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Thaumatin-like protein L3 n=1 Tax=Pinus monticola RepID=D3IZ07_PINMO	-	-	1.0e-20	88%
FL-Next	tr=Thaumatin-like protein L3; Pinus monticola (Western white pine) (Strobus monticola).	-	-	0.0	88%
Blast2go	thaumatin-like protein	-	-	1.93638e-20	86%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D3IZ07

Fln msg: Distance to subject end: 179 aas, your sequence is shorter than subject: 54 - 234

Fln protein: MARALGVLLIFMAALYICMQGVRCATFEIQNECPFTVWAAGIPNVGGKQLERGQ

Protein Length: 55

Fln nts: ATGGGGATACTCAGACTTGAGAATATTCACAATTACTTGCTTCCTCGTACAGTCTCTTCGTGAGTGAAAGTTCGAATCACAGCGGTAGCA_-_ATGGCGAGAGCGTTGGGAGTTTTGCTTATATTCATGGCAGCGTTATACATTTGCATGCAAGGTGTAAGATGCGCGACATTCGAGATCCAAAACGAGTGCCCGTTCACTGTTTGGGCAGCCGGGATTCCCAACGTTGGAGGGAAACAGCTGGAGCGAGGGCAGTC

Fln Alignment:

sp_v1.1_unigene26154___MARALGVLLIFMAALYICMQGVRCATFEIQNECPFTVWAAGIPNVGGKQLERGQ
D3IZ07_______________MARALGVLFTFMAALYICVQGVGCATFEIQNECPFTVWAAGTPGVGGKQLERGQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain