SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25993

Length: 1139 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25993

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RNA polymerase II ctd phosphatase, putative (EC:3.1.3.16)	-	-	2.0e-30	56%
FL-Next	sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	59%
Blast2go	protein	-	-	7.65585e-34	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salt stress	GO:0009651	Biological Process	7.65585e-34	75%
Blast2go	protein C-terminus binding	GO:0008022	Molecular Function	7.65585e-34	75%
Blast2go	nucleus	GO:0005634	Cellular Component	7.65585e-34	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	BRCT domain	IPR001357	-	7.65585e-34	75%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
670	20		80		0.995493
779		66	33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain