SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25963

Length: 900 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25963

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	similar to GRV2 (KATAMARI2); binding / heat shock protein binding; K09533 DnaJ homolog subfamily C member 13	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	96%
Blast2go	heat shock protein binding	-	-	86%

Source	GOs	Term	Type	Identity
Blast2go	positive gravitropism	GO:0009958	Biological Process	86%
Blast2go	response to starvation	GO:0042594	Biological Process	86%
Blast2go	protein targeting to vacuole	GO:0006623	Biological Process	86%
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	86%
Blast2go	amyloplast organization	GO:0009660	Biological Process	86%
Blast2go	cell division	GO:0051301	Biological Process	86%
Blast2go	negative gravitropism	GO:0009959	Biological Process	86%
Blast2go	vacuole organization	GO:0007033	Biological Process	86%
Blast2go	endosome organization	GO:0007032	Biological Process	86%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	86%
Blast2go	late endosome	GO:0005770	Cellular Component	86%
Blast2go	microsome	GO:0005792	Cellular Component	86%
Blast2go	trans-Golgi network	GO:0005802	Cellular Component	86%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	86%
Blast2go	plasma membrane	GO:0005886	Cellular Component	86%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
688	25		75		0.996473
819	60		40		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain