SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25844

Length: 1356 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25844

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Anthocyanidin reductase n=1 Tax=Ginkgo biloba RepID=Q5XLY0_GINBI	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	85%
Blast2go	anthocyanidin reductase	-	-	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	NAD-dependent epimerase/dehydratase	IPR001509	-	0.0	78%
Blast2go	NAD(P)-binding domain	IPR016040	-	0.0	78%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LRT5

Fln msg:

Fln protein: MTTTVGNGREYKETTVCVTGATGFLASSLVKRLLDKGYTVHATVRDPGNEVKVRPLLDISGAAERLKLFKADLSEDGSFDAAVAGCQGVFHLATPIDFAPKDPENDVIKPAINGTLNVLKSCTKAQTVKRVVVTSSAATVSINESTEQNQQLDESSWTDLDFLQTKKPPTWSYAVSKTLAEQAALQYGKEQGLDVVTIVPVLLVGPSILPDVPSSVHLALSLLTGNPHLLQAIKGMQLLSGCVSMVHVDDVCSAHIFLMDNPSATGRYICCPINTSVPQLADYLSKRYPQYNVPTEFEGVPQTQKLNMSSKKLVESGFSFKFGIDEIYDDAVESAKAKGLLA*

Protein Length: 344

Fln nts: ATGGGGACCCCAATCAAATGTCAGACATGTCCAACTGCCTGGCAGATGCATATCTGCCATTCTAACATCACACTCTTACCTAATCACATTCAAAGGGACTTTCTTATATAAAACGCATTCTCGACACATTCATAGAGCGTCTAGTTATCTCTCGTCTTTTCCAGTCGCTTAATCTTCAAGCCGCTCCAGGTGTCAACGCGAAA_-_ATGACAACAACCGTTGGCAATGGCAGAGAGTATAAGGAAACCACCGTCTGCGTGACGGGAGCAACAGGCTTTCTGGCTTCATCGCTCGTCAAACGTTTACTCGACAAAGGTTACACTGTCCACGCAACGGTGCGCGACCCAGGGAACGAAGTGAAGGTGCGCCCTCTGCTGGACATTTCTGGAGCTGCAGAGAGGCTCAAGCTCTTTAAAGCGGATCTGTCGGAAGACGGCAGTTTCGACGCCGCCGTTGCCGGCTGCCAGGGCGTTTTTCATCTCGCCACTCCGATCGATTTCGCACCCAAAGATCCAGAGAATGATGTGATCAAGCCAGCGATCAACGGAACCCTTAATGTTCTGAAGTCTTGCACGAAGGCCCAAACCGTGAAACGCGTGGTGGTCACATCGTCCGCGGCCACGGTTTCCATAAACGAATCAACGGAGCAGAATCAGCAGCTCGACGAATCCAGCTGGACAGACCTCGATTTCCTCCAAACTAAAAAGCCCCCCACCTGGTCATATGCAGTTTCCAAGACGCTGGCAGAGCAAGCAGCGCTGCAATACGGTAAAGAACAGGGGCTGGATGTCGTCACCATCGTCCCAGTGTTGCTGGTGGGCCCCTCCATCCTTCCCGACGTGCCGTCCAGCGTCCACCTGGCGCTCTCACTGCTTACTGGCAATCCCCACCTGTTGCAGGCTATTAAGGGCATGCAGTTGTTGTCCGGCTGCGTATCAATGGTACACGTGGACGACGTCTGTAGTGCACATATTTTCTTGATGGACAACCCCTCTGCAACGGGTCGCTACATCTGCTGTCCCATCAACACCTCCGTCCCACAGCTGGCAGACTACTTATCCAAACGCTATCCGCAGTACAATGTCCCGACTGAGTTCGAGGGTGTGCCACAAACCCAGAAGTTGAACATGTCGTCGAAGAAATTGGTGGAGAGTGGTTTCTCCTTCAAATTTGGCATCGACGAAATCTACGATGACGCTGTAGAATCCGCGAAGGCGAAGGGATTGCTGGCTTAA___CTACTCTACGAATAACAAAACAGAGCTGTTTTCTTCCCATGGAAATAATACCACGCACTGTGTGTTTGGTGGTATTCGTAGTAAAAAATGTTTATTTAACTTTTTAAGTCGTGACAGGTTATTA

Fln Alignment:

sp_v1.1_unigene25844___MTTTVGNGREYKETTVCVTGATGFLASSLVKRLLDKGYTVHATVRDPGNEVKVRPLLDISGAAERLKLFKADLSEDGSFDAAVAGCQGVFHLATPIDFAPKDPENDVIKPAINGTLNVLKSCTKAQTVKRXXXXXXXXXXXINESTEQNQQLDESSWTDLDFLQTKKPPTWSYAVSKTLAEQAALQYGKEQGLDVVTIVPVLLVGPSILPDVPSSVHLALSLLTGNPHLLQAIKGMQLLSGCVSMVHVDDVCSAHIFLMDNPSATGRYICCPINTSVPQLADYLSKRYPQYNVPTEFEGVPQTQKLNMSSKKLVESGFSFKFGIDEIYDDAVE
B8LRT5_______________MAETIVNGQDCKGTTVCVTGASGFMASWLVKRLLQKGYTVHATVRDPENEAKVRHLLDISGAAERLKLFRAELSEDGSYDAAVAGCHGVFHVATPIDFEPKDPENDVIKPAINGTLNVLKSCTKSKTVKRVVVTSSAATVSINESAEQNQYIDESCWTDVDFLQTKKPPTWSYPVSKTLAEQAALQYGKEQGLDVVTIIPVLVVGPSITPSVPSSVQLALSFLTGNPHTLQAIKGMQLVSGSVSLVHVDDVCSAHIFLMENPSAEGRHICCPINTSVPQLAKYLSKRYPQYNVPTQFEDVPQTAKVNISSKKLVESGFSFKFGIDEIYDDAVE

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
197		66		33	0.997452
198			66	33	0.997452
199		66	33		0.997452
600	66		33		0.997452
928		5	94		1.0
1033		5		94	0.999996
1264		10		90	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain