SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25839

Length: 1618 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25839

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 720B2 n=1 Tax=Pinus taeda RepID=C72B2_PINTA	-	-	93%
FL-Next	sp=Cytochrome P450 720B2; Pinus taeda (Loblolly pine).	-	-	96%
Blast2go	cytochrome p450 family protein	-	-	81%

Source	InterPros	Term	Type	Identity
Blast2go	Cytochrome P450	IPR001128	-	81%
Blast2go	Cytochrome P450, E-class, group I	IPR002401	-	81%
Blast2go	Cytochrome P450, conserved site	IPR017972	-	81%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: Q50EK5

Fln msg:

Fln protein: MAIMVETLHSWLVGLLCFALGILLLQLYKLVWGASSRAYKLPPGSTGWPLIGETISFFRGINSTAQPRQFIQERERRYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQKKLHGAAVNLLRFERLSVDFMEDIQNLLHITLAKWQAKRDIHLQEECHQLVLNLMAKQLLDLSPSKDTEEICEAFGHFSEALLAVPIKIPGTKYARGFKAREFLIKKIYESIEDRRQHPEAVHNDLLTKLLKEDLFSEEIIADFILFLLFAGHETSSRSMSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQQHLQDQELSKNPSFMPFGGGARLCPGMHLAKLELALFLHNFVTKFRWEALQDEKISYFPFPRLIKGLPIRLHPQERLDD*

Protein Length: 490

Fln nts: AGTTGCTCTGTGAAGAAATCATTGCA_-_ATGGCAATAATGGTGGAAACCCTTCATTCGTGGCTAGTCGGCCTGCTCTGTTTCGCCCTGGGCATCTTACTGCTTCAGCTCTACAAATTAGTGTGGGGGGCGAGCAGTCGAGCCTACAAGTTGCCGCCGGGTTCTACAGGGTGGCCACTGATTGGAGAAACCATCAGCTTCTTTCGAGGTATTAATTCCACTGCTCAACCACGCCAGTTCATTCAAGAGCGAGAGCGAAGGTATGGGGAGATATTCAGATCAAATTTGTTTGGAAGATCTCGAATTGTTGTGTCCGTGGATCCAGAATTCAACAAACATGTCCTGCAACACGAAGGCAGGCAATTTCAGGCCAACTATCCCAAACCTCTTCGAAATCTCATTGGCAAATATGGTTTGCTTTCGGTACACGGAGATCTCCAGAAGAAGTTACATGGGGCGGCTGTAAATTTGCTGAGGTTCGAGAGGTTGAGCGTGGACTTCATGGAGGACATACAGAACCTTCTGCACATCACTTTGGCCAAATGGCAAGCCAAGAGGGATATACATCTTCAAGAAGAGTGCCATCAGCTTGTTCTGAATTTGATGGCCAAACAATTGCTGGACTTATCGCCATCCAAGGACACTGAAGAGATTTGTGAAGCGTTTGGCCATTTCTCTGAAGCTCTCCTCGCTGTTCCAATCAAAATCCCGGGTACCAAGTATGCAAGAGGATTTAAGGCCAGGGAATTTTTGATAAAAAAGATTTACGAGAGTATCGAGGATAGAAGGCAGCATCCAGAAGCTGTACATAATGATTTGTTAACAAAACTCTTGAAAGAAGACTTGTTTTCAGAAGAAATTATAGCAGATTTTATACTGTTCCTGCTCTTTGCTGGTCACGAGACATCGTCCAGATCCATGTCATTCGCTATCAAATTTCTCACCGACTGTCCCCGAGCACTCGAGGAACTTAAGGCTGAGCACGACGCTCTGTTAAAGAGGAAGGGGAATCTAAAAAATCAAAAGCTCAATTGGGATGATTACCAGTCGTTGAAATTCACCCAATGTGTCATACATGAAACACTTCGTGTCGGCAACTTTGGTCCAGGAGTTTTCAGAGAAACAAAAGAAGACATTAAAACCAAAGGAGGCTTTGTGATTCCAAGAGGATGGACAGTGTATGTGTTTCTAACAGGCACCCATCTGGACGAGAAGTACCATTCTTCTGCACTCAAGTTTGACCCATGGCGTTGGCAGCAGCATCTTCAAGATCAAGAGCTATCAAAGAACCCCTCGTTTATGCCTTTTGGGGGAGGTGCCAGGCTCTGTCCAGGAATGCATCTGGCAAAGCTTGAGCTGGCTCTCTTCCTTCATAACTTCGTCACCAAATTCAGGTGGGAGGCACTGCAGGATGAAAAGATCTCCTACTTTCCTTTTCCTCGCTTGATTAAAGGCCTTCCAATCCGTCTACATCCTCAAGAGCGACTGGACGATTAA___TCTCATTGAGGTGGGATTTAATTCATGCAGCCTGGAGTGTTAAAAAAACTAGATTTACTTGAAGAATAAAGTACTTGGCACCCTGCGGACACAAGTTCTAGGTTTAATCGCATATGTTGGCGTGA

Fln Alignment:

sp_v1.1_unigene25839___IMVETL-HSWXXXXXXXXXXXXXXXXYKLVWGASSRAYKLPPGSTGWPLIGETISFFRGINSTAQPRQFIQERERRYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQKKLHGAAVNLLRFERLSVDFMEDIQNLLHITLAKWQAKRDIHLQEECHQLVLNLMAKQLLDLSPSKDTEEICEAFGHFSEALLAVPIKIPGTKYARGFKAREFLIKKIYESIEDRRQHPEAVHNDLLTKLLKEDLFSEEIIADFILFLLFAGHETSSRSMSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQQHLQDQELSKNPSFMPFGGGARLCPGMHLAKLELALFLHNFVTKFRWEALQDEKISYFPFPRLIKGLPIRLHPQE
Q50EK5_______________IMTETLTDSWLVGLLCLVLGFLLLQLYKLVWGASSRAYKLPPGSTGWPLIGETISFFRGINSTAQPRQFIQEREQRYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQRKLHGAAVNLLRFERLSVDFMEDIQNLLHITLAKWEAKRDIHLQEECHQLVLNLMAKQLLDLSPSKDTEEICEAFGHFSEALLAVPIKIPGTKYARGFKAREFLIKKIYESIEDRRQHPEAVHNDLLTKLLKEDSFSEEIIADFILFLLFAGHETSSRSMSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVTKFRWEALQDDKISYFPFPRLIKGLPIRLRLRE

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
487	16		83		0.994512
916		10		90	0.90298
1154	16	66	16		0.988813
1226	96			3	0.980996
1231	96	3			0.982166
1462			66	33	0.997452
1463		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain