SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25759

Length: 1019 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25759

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to ADP-ribosylation factor 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587A84	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	56%
Blast2go	adp-ribosylation factor 1	-	-	75%

Source	InterPros	Term	Type	Identity
Blast2go	Small GTPase superfamily, Rab type	IPR003579	-	75%
Blast2go	Small GTP-binding protein domain	IPR005225	-	75%
Blast2go	Small GTPase superfamily, SAR1-type	IPR006687	-	75%
Blast2go	ADP-ribosylation factor	IPR006688	-	75%
Blast2go	Small GTPase superfamily, ARF/SAR type	IPR006689	-	75%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
569	11			88	0.999952
653	76		23		1.0
860		13		86	0.999973
881	85			14	0.999981
951	83	16			0.999991

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain