SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25757

Length: 1261 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25757

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA	-	-	94%
FL-Next	tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	97%
Blast2go	alkaloid o-methyltransferase related	-	-	76%

Source	InterPros	Term	Type	Identity
Blast2go	O-methyltransferase, family 2	IPR001077	-	76%
Blast2go	Winged helix-turn-helix transcription repressor DNA-binding	IPR011991	-	76%
Blast2go	Plant methyltransferase dimerisation	IPR012967	-	76%
Blast2go	O-methyltransferase, COMT, eukaryota	IPR016461	-	76%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q9SYU3

Fln msg: your sequence is shorter than subject: 362 - 382

Fln protein: FESEEEELQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGPRATLSLDEIVAKLPTESPDAACLFRIMRFLVAKGIFCASKSAREGGAFETRYGLTPASKWLVKGRELSMAPMLLMQNDKTTLAPWHHFNECVLEGGVAFKKANGAEIWSYASDHPDFNNLFNNAMACNARIVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFITGINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCKKAIPDTGKVIIVDVVLDADQGDNTDKKRKKAVDPIVSTVFDLVMVAHSSGGKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFPR*

Protein Length: 363

Fln nts: TTTTTGAGAGCGAGGAAGAGGAATTGCAGGGGCAGGCGGAGGCTTGGAAGTGTACTTTCGCGTTTGCGGAGTCGTTGGCAGTGAAATGCGTGGTTTTGCTGGGAATTCCCGACATGATCGCTCGCGAAGGTCCCCGCGCCACTCTTTCCCTCGACGAAATCGTGGCCAAGCTGCCCACTGAATCTCCCGATGCCGCCTGCCTCTTCAGAATTATGCGCTTCCTTGTGGCTAAGGGCATCTTCTGCGCCTCCAAAAGCGCGCGTGAGGGCGGTGCCTTCGAGACGAGATATGGCCTCACGCCCGCGTCCAAGTGGCTGGTGAAAGGGCGGGAGCTTTCGATGGCGCCCATGCTGCTGATGCAGAACGACAAGACAACGTTAGCGCCGTGGCACCATTTCAACGAGTGCGTGCTCGAGGGGGGCGTTGCCTTCAAGAAGGCCAACGGTGCAGAGATCTGGTCTTATGCCTCCGATCACCCTGACTTCAACAATCTCTTCAACAACGCCATGGCCTGCAACGCCAGAATTGTGATGAAGGCTATTCTGTCGAAATACCAAGGCTTCCACTCCCTCAATTCCTTGGTGGACGTTGGGGGTGGGACTGGAACCGCTGTGGCAGAGATTGTTAGAGCTTACCCTTTCATCACAGGCATCAACTACGACCTCCCTCATGTCGTGGCCACTGCTTCGTCTCTTTCAGGTGTGCAGCACGTGGGGGGAGACATGTTTGAAACAGTGCCCACTGGCGATGCCATATTCATGAAGTGGATCATGCATGACTGGAACGATGAGGACTGTATCAAGATACTCAAGAATTGCAAGAAAGCGATCCCTGATACAGGAAAGGTGATCATAGTAGACGTCGTGCTGGACGCCGATCAAGGAGATAATACTGATAAAAAGAGAAAAAAGGCCGTGGATCCCATTGTTAGCACAGTATTTGATCTGGTAATGGTGGCGCATAGTTCCGGCGGGAAAGAGAGAACAGAGAAAGAATGGAAGAGAATCTTATTGGAAGGCGGGTTTAGTCGTTACAACATAATCGAAATTCCAGCGTTGCAGTCTGTGATTGAGGCGTTCCCTCGTTGA___GCTGTATGCATATTCTGAATAAAATACTTATCTGTGATGATAAAATCAATGATAGATAAAATATGAATATGACAGATTTGTCGGACATTGAAGATTTGGACCGTCATTGTTCTACTTCCCCATTATTGGTCAGCTGTATCATTTTTTTCTGTCCCGACTGTTAAAGTGTAATG

Fln Alignment:

sp_v1.1_unigene25757___LQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGPRATLSLDEIVAKLPTESPDAACLFRIMRFLVAKGIFCASKSAREGGAFETRYGLTPASKWLVKGRELSMAPMLLMQNDKTTLAPWHHFNECVLEGGVAFKKANGAEIWSYASDHPDFNNLFNNAMACNARIVMKAILSKYQGFHSLNSLVDXXXXXXXXXXEIVRAYPFITGINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCKKAIPDTGKVIIVDVVLDADQGDNTDKKRKKAVDPIVSTVFDLVMVAHSSGGKERTEKEWKRILLEGGFSRYNIIEIPALQSVIEAFPR
Q9SYU3_______________LQGQAEAWKCTFAFAESLAVKCVVLLGIPDMIAREGPRATLSLGEIVAKLPTESPDAACLFRIMRFLVAKGIFRASKSAREGGAFETRYGLTPASKWLVKGRELSMAPMLLMQNDETTLAPWHHFNECVLEGGVAFQKANGAEIWSYASDHPDFNNLFNNAMACNARIVMKAILSKYQGFHSLNSLVDVGGGTGTAVAEIVRAYPFIRGINYDLPHVVATASSLSGVQHVGGDMFETVPTGDAIFMKWIMHDWNDEDCIKILKNCRKAIPDTGKVIIVDVVLDADQGDNTDKKRKKAVDPIVGTVFDLVMVAHSSGGKERSEKEWKRILLEGGFSRYNIIEIPALQSVIEAFPR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain