SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25565

Length: 706 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25565

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Zeaxanthin epoxidase n=2 Tax=Selaginella moellendorffii RepID=D8RMD9_SELML	-	-	3.0e-12	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	68%
Blast2go	zeaxanthin epoxidase	-	-	4.65439e-12	92%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:1.14.13.9-	-	4.65439e-12	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to red light	GO:0010114	Biological Process	4.65439e-12	92%
Blast2go	response to water deprivation	GO:0009414	Biological Process	4.65439e-12	92%
Blast2go	xanthophyll biosynthetic process	GO:0016123	Biological Process	4.65439e-12	92%
Blast2go	response to heat	GO:0009408	Biological Process	4.65439e-12	92%
Blast2go	response to osmotic stress	GO:0006970	Biological Process	4.65439e-12	92%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	4.65439e-12	92%
Blast2go	abscisic acid biosynthetic process	GO:0009688	Biological Process	4.65439e-12	92%
Blast2go	zeaxanthin epoxidase [overall] activity	GO:0009540	Molecular Function	4.65439e-12	92%
Blast2go	chloroplast	GO:0009507	Cellular Component	4.65439e-12	92%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Zinc finger, BED-type predicted	IPR003656	-	4.65439e-12	92%

Full-Lengther Next Prediction

SNPs (tot: 86)

Position	A %	C %	G %	T %	Probability
138	66		33		0.997452
139			66	33	0.997452
141	33	66			0.997452
142		33		66	0.997452
150			33	66	0.997452
152		33	66		0.997452
154	75	25			0.996473
157	25			75	0.996473
159			75	25	0.996473
182		75		25	0.996473
222	25		75		0.996473
230	50		50		1.0
238	75		25		1.0
250		87		12	0.992554
257	37	62			1.0
275		12	87		0.992554
277		75		25	1.0
278	87	12			0.992554
279	12		87		0.992554
283			87	12	0.992554
285	37		50	12	1.0
289		87		12	0.992554
291		75		25	1.0
292	25		75		1.0
301	85		14		0.993533
308	14		85		0.993533
309	14		85		0.993533
313	14		85		0.993533
318		14		85	0.993533
319		57		42	1.0
321	14		85		0.993533
324		42		57	1.0
338	85		14		0.993533
339	85		14		0.993533
355	14	85			0.993533
360	14		85		0.993533
362	85		14		0.993533
363	14		85		0.993533
365	14		85		0.993533
366			85	14	0.993533
370			14	85	0.993533
378	16		83		0.994512
382	16		50	33	1.0
393			83	16	0.994512
394		66		33	1.0
414	16		83		0.994512
415		66		33	1.0
416			16	83	0.994512
417	16		83		0.994512
419		16	16	66	0.988813
430		83		16	0.994512
439		83		16	0.994512
442	83		16		0.994512
448	83	16			0.994512
449	16		83		0.994512
451		16		83	0.994512
454			20	80	0.995493
474	25	25		25	0.997389
490	25		75		0.996473
504	66	33			0.997452
506	33		66		0.997452
560	85			14	0.999981
566		85		14	0.999981
567	85	14			0.999981
573		85		14	0.999981
579		38		7	1.0
581	14		85		0.999981
588	42		57		1.0
621	15			84	0.999986
627			84	15	0.999986
643			10	90	0.90298
644		80		20	0.999996
645	90	10			0.90298
646	20		80		0.999996
647		60		40	1.0
658	90		10		0.90298
660		80		20	0.999996
663		90		10	0.90298
664		20		80	0.999996
681	14	85			0.993533
692	14		85		0.993533
697		85	14		0.993533
706		50		50	1.0
708	33		66		0.997452
712		66		33	0.997452
715		33		66	0.997452

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain