SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25397

Length: 843 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25397

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Histone H3 n=2 Tax=Coelomata RepID=B0X778_CULQU	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	99%
Blast2go	histone h3	-	-	98%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastid	GO:0009536	Cellular Component	0.0	98%

Source	InterPros	Term	Type	Identity
Blast2go	Histone H3	IPR000164	-	98%
Blast2go	Histone core	IPR007125	-	98%
Blast2go	Histone-fold	IPR009072	-	98%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
33		57	28		1.0
36		14		85	0.993533
37		85		14	0.993533
42		85		14	0.993533
61	14		85		0.993533
66	85			14	0.993533
79		14	85		0.993533
235		48		51	1.0
238			48	51	1.0
281		54		45	1.0
283	51		48		1.0
286	44			55	1.0
313	44		56		1.0
355	56		43		1.0
367		62	35		1.0
370		80		19	1.0
382	83		12		1.0
403		4		95	0.999981
407		71		28	1.0
436		39		60	1.0
451		94	6		0.999998
454		91		8	1.0
508	32		67		1.0
529	73		26		1.0
550	80		20		1.0
702		33	66		0.997452
722	66		33		0.997452
745		66	33		0.997452
755	33		66		0.997452
774		66	33		0.997452
776			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain