SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25396

Length: 998 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25396

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: histone H3-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE1C55	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	histone h3	-	-	97%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastid	GO:0009536	Cellular Component	0.0	97%

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
457	90			7	0.999998
458	90	7		2	0.999998
460		2	92		0.98868
582		10		89	1.0
585		94		5	0.9982
600	4	95			0.994598
603		53		4	1.0
604		59		2	1.0
605	2	57	2		1.0
607			2	59	1.0
710			92	7	1.0
722	5		94		0.998578
724		5	94		0.998578
773	15	84			0.999986
845	71		28		1.0
902	14		85		0.993533
930		66		33	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
568	583	TTG TTG TTG TTG TTG T	16

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain