SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25380

Length: 807 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25380

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA	-	-	94%
FL-Next	sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	94%
Blast2go	lipid transfer protein	-	-	58%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
27	25			75	0.996473
29	20		20	60	0.99255
30		60	20	20	0.99255
32		60	40		1.0
33	80		20		0.995493
101		80		20	0.995493
200	80		20		0.995493
455	83		1		1.0
458	83		1		1.0
460			3	94	0.999794
461	3			96	0.999965
467	96			3	0.983282
468		96		3	0.983282
482		13		86	1.0
559		70	29		1.0
571		96		3	0.983282
576		74	25		1.0
581		72	27		1.0
648	18	6		75	1.0
650	9		9	54	1.0
651	37			62	1.0
652	37	62			1.0
653	42			57	1.0
654	42		57		1.0
655	42			57	1.0
656	33			66	1.0
657	20			80	0.995493
658	20	80			0.995493
659	20	80			0.995493
660	80		20		0.995493
690	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain