SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25298

Length: 786 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25298

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	multicopper oxidase, putative (EC:1.10.3.3)	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Blast2go	multicopper oxidase	-	-	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	plant-type cell wall	GO:0009505	Cellular Component	0.0	79%
Blast2go	apoplast	GO:0048046	Cellular Component	0.0	79%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cupredoxin	IPR008972	-	0.0	79%
Blast2go	Multicopper oxidase, type 2	IPR011706	-	0.0	79%

Full-Lengther Next Prediction

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
63		66	33		0.997452
64		33	66		0.997452
67	66			33	0.997452
69		66		33	0.997452
70			33	66	0.997452
75	33			66	0.997452
76	33		66		0.997452
81		33		66	0.997452
82		66	33		0.997452
83	66			33	0.997452
85	33	33			0.997753
127	75	25			0.996473
131	75		25		0.996473
134	25		75		0.996473
137		25		75	0.996473
142	75	25			0.996473
146		25	75		0.996473
149	75	25			0.996473
150	25			75	0.996473
183	90		10		0.90298
185		10	90		0.90298
187	90			10	0.90298
188		90	10		0.90298
194		90	10		0.90298
195	90	10			0.90298
196	90			10	0.90298
199	90	10			0.90298
200	10		90		0.90298
201		10	90		0.90298
204	10			90	0.90298
311		8	92		0.999718
315	88			12	1.0
318	78	17	3		1.0
319	78	14	7		1.0
320		17		82	1.0
321	78		10		1.0
324	10		89		1.0
326		89	10		1.0
327	82			17	1.0
329	10		89		1.0
331		85		14	1.0
332	82	10	3	3	1.0
334		3		88	0.998862
517	86		13		1.0
519			86	13	1.0
527	86		13		1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain