SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene25161

Length: 619 nt

Origin of reads: Biogeco_1 Biogeco_2

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene25161

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Heat-shock protein, putative n=2 Tax=Ricinus communis RepID=B9T5S1_RICCO	-	-	1.99965e-42	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	heat shock protein 18	-	-	0.0	73%

Source	GOs	Term	Type	Identity
Blast2go	response to high light intensity	GO:0009644	Biological Process	73%
Blast2go	response to hydrogen peroxide	GO:0042542	Biological Process	73%
Blast2go	heat acclimation	GO:0010286	Biological Process	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein Hsp20	IPR002068	-	0.0	73%
Blast2go	HSP20-like chaperone	IPR008978	-	0.0	73%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
24		83		16	0.994512
27		16		83	0.994512
210	83		16		0.994512
307	50		50		1.0
312	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain