SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene24951

Length: 998 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene24951

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	plasma membrane associated protein	-	-	9.0e-34	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	plasma membrane associated protein	-	-	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	AWPM-19-like	IPR008390	-	0.0	80%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
384			33	66	0.997452
399	10		90		0.90298
404	20			80	0.999996
540		85		14	0.993533
541	85		14		0.993533
542			14	85	0.993533
543	85		14		0.993533
577	85		14		0.993533
801		28		71	1.0
853	28	71			1.0
974		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain